Sample total_passed total_failed secondary_passed secondary_failed supplementary_passed supplementary_failed duplicates_passed duplicates_failed mapped_passed mapped_failed mapped_passed_pct mapped_failed_pct paired in sequencing_passed paired in sequencing_failed read1_passed read1_failed read2_passed read2_failed properly paired_passed properly paired_failed properly paired_passed_pct properly paired_failed_pct with itself and mate mapped_passed with itself and mate mapped_failed singletons_passed singletons_failed singletons_passed_pct singletons_failed_pct with mate mapped to a different chr_passed with mate mapped to a different chr_failed with mate mapped to a different chr (mapQ >= 5)_passed with mate mapped to a different chr (mapQ >= 5)_failed flagstat_total G264_M01_statistics_for_all_accepted_reads 67544424 0 8335786 0 0 0 0 0 67544424 0 100.0 nan 59208638 0 29604319 0 29604319 0 59208638 0 100.0 nan 59208638 0 0 0 0.0 nan 0 0 0 0 67544424 G264_M01_statistics_for_primary_reads 59208638 0 0 0 0 0 0 0 59208638 0 100.0 nan 59208638 0 29604319 0 29604319 0 59208638 0 100.0 nan 59208638 0 0 0 0.0 nan 0 0 0 0 59208638 G264_M01_statistics_for_primary_unique_reads 54752198 0 0 0 0 0 0 0 54752198 0 100.0 nan 54752198 0 27376099 0 27376099 0 54752198 0 100.0 nan 54752198 0 0 0 0.0 nan 0 0 0 0 54752198 G264_M02_statistics_for_all_accepted_reads 54187458 0 6534064 0 0 0 0 0 54187458 0 100.0 nan 47653394 0 23826697 0 23826697 0 47653394 0 100.0 nan 47653394 0 0 0 0.0 nan 0 0 0 0 54187458 G264_M02_statistics_for_primary_reads 47653394 0 0 0 0 0 0 0 47653394 0 100.0 nan 47653394 0 23826697 0 23826697 0 47653394 0 100.0 nan 47653394 0 0 0 0.0 nan 0 0 0 0 47653394 G264_M02_statistics_for_primary_unique_reads 43863914 0 0 0 0 0 0 0 43863914 0 100.0 nan 43863914 0 21931957 0 21931957 0 43863914 0 100.0 nan 43863914 0 0 0 0.0 nan 0 0 0 0 43863914 G264_M03_statistics_for_all_accepted_reads 41525042 0 5285154 0 0 0 0 0 41525042 0 100.0 nan 36239888 0 18119944 0 18119944 0 36239888 0 100.0 nan 36239888 0 0 0 0.0 nan 0 0 0 0 41525042 G264_M03_statistics_for_primary_reads 36239888 0 0 0 0 0 0 0 36239888 0 100.0 nan 36239888 0 18119944 0 18119944 0 36239888 0 100.0 nan 36239888 0 0 0 0.0 nan 0 0 0 0 36239888 G264_M03_statistics_for_primary_unique_reads 33344010 0 0 0 0 0 0 0 33344010 0 100.0 nan 33344010 0 16672005 0 16672005 0 33344010 0 100.0 nan 33344010 0 0 0 0.0 nan 0 0 0 0 33344010 G264_M04_statistics_for_all_accepted_reads 38505166 0 4499666 0 0 0 0 0 38505166 0 100.0 nan 34005500 0 17002750 0 17002750 0 34005500 0 100.0 nan 34005500 0 0 0 0.0 nan 0 0 0 0 38505166 G264_M04_statistics_for_primary_reads 34005500 0 0 0 0 0 0 0 34005500 0 100.0 nan 34005500 0 17002750 0 17002750 0 34005500 0 100.0 nan 34005500 0 0 0 0.0 nan 0 0 0 0 34005500 G264_M04_statistics_for_primary_unique_reads 31427660 0 0 0 0 0 0 0 31427660 0 100.0 nan 31427660 0 15713830 0 15713830 0 31427660 0 100.0 nan 31427660 0 0 0 0.0 nan 0 0 0 0 31427660 G264_M05_statistics_for_all_accepted_reads 23764364 0 2966684 0 0 0 0 0 23764364 0 100.0 nan 20797680 0 10398840 0 10398840 0 20797680 0 100.0 nan 20797680 0 0 0 0.0 nan 0 0 0 0 23764364 G264_M05_statistics_for_primary_reads 20797680 0 0 0 0 0 0 0 20797680 0 100.0 nan 20797680 0 10398840 0 10398840 0 20797680 0 100.0 nan 20797680 0 0 0 0.0 nan 0 0 0 0 20797680 G264_M05_statistics_for_primary_unique_reads 19208292 0 0 0 0 0 0 0 19208292 0 100.0 nan 19208292 0 9604146 0 9604146 0 19208292 0 100.0 nan 19208292 0 0 0 0.0 nan 0 0 0 0 19208292 G264_M06_statistics_for_all_accepted_reads 36593634 0 4514250 0 0 0 0 0 36593634 0 100.0 nan 32079384 0 16039692 0 16039692 0 32079384 0 100.0 nan 32079384 0 0 0 0.0 nan 0 0 0 0 36593634 G264_M06_statistics_for_primary_reads 32079384 0 0 0 0 0 0 0 32079384 0 100.0 nan 32079384 0 16039692 0 16039692 0 32079384 0 100.0 nan 32079384 0 0 0 0.0 nan 0 0 0 0 32079384 G264_M06_statistics_for_primary_unique_reads 29547362 0 0 0 0 0 0 0 29547362 0 100.0 nan 29547362 0 14773681 0 14773681 0 29547362 0 100.0 nan 29547362 0 0 0 0.0 nan 0 0 0 0 29547362 statistics_for_primary_unique_reads 19208292 0 0 0 0 0 0 0 19208292 0 100.0 nan 19208292 0 9604146 0 9604146 0 19208292 0 100.0 nan 19208292 0 0 0 0.0 nan 0 0 0 0 19208292