Module	Section	Sample Name	Source
RSeQC	infer_experiment	G263_M01_Read_Strandness	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M01/Read_Strandness/G263_M01_Read_Strandness.txt
RSeQC	infer_experiment	G263_M03_Read_Strandness	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M03/Read_Strandness/G263_M03_Read_Strandness.txt
RSeQC	infer_experiment	G263_M11_Read_Strandness	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M11/Read_Strandness/G263_M11_Read_Strandness.txt
RSeQC	infer_experiment	G263_M10_Read_Strandness	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M10/Read_Strandness/G263_M10_Read_Strandness.txt
RSeQC	infer_experiment	G263_M06_Read_Strandness	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M06/Read_Strandness/G263_M06_Read_Strandness.txt
RSeQC	infer_experiment	G263_M13_Read_Strandness	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M13/Read_Strandness/G263_M13_Read_Strandness.txt
RSeQC	infer_experiment	G263_M09_Read_Strandness	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M09/Read_Strandness/G263_M09_Read_Strandness.txt
RSeQC	infer_experiment	G263_M08_Read_Strandness	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M08/Read_Strandness/G263_M08_Read_Strandness.txt
RSeQC	infer_experiment	G263_M02_Read_Strandness	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M02/Read_Strandness/G263_M02_Read_Strandness.txt
RSeQC	infer_experiment	G263_M05_Read_Strandness	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M05/Read_Strandness/G263_M05_Read_Strandness.txt
RSeQC	infer_experiment	G263_M04_Read_Strandness	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M04/Read_Strandness/G263_M04_Read_Strandness.txt
RSeQC	infer_experiment	G263_M12_Read_Strandness	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M12/Read_Strandness/G263_M12_Read_Strandness.txt
RSeQC	infer_experiment	G263_M07_Read_Strandness	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M07/Read_Strandness/G263_M07_Read_Strandness.txt
featureCounts	all_sections	G263_M01_sorted	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M01/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/G263_M01_featureCounts.out.summary
featureCounts	all_sections	G263_M03_sorted	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M03/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/G263_M03_featureCounts.out.summary
featureCounts	all_sections	G263_M11_sorted	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M11/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/G263_M11_featureCounts.out.summary
featureCounts	all_sections	G263_M10_sorted	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M10/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/G263_M10_featureCounts.out.summary
featureCounts	all_sections	G263_M06_sorted	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M06/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/G263_M06_featureCounts.out.summary
featureCounts	all_sections	G263_M13_sorted	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M13/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/G263_M13_featureCounts.out.summary
featureCounts	all_sections	G263_M09_sorted	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M09/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/G263_M09_featureCounts.out.summary
featureCounts	all_sections	G263_M08_sorted	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M08/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/G263_M08_featureCounts.out.summary
featureCounts	all_sections	G263_M02_sorted	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M02/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/G263_M02_featureCounts.out.summary
featureCounts	all_sections	G263_M05_sorted	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M05/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/G263_M05_featureCounts.out.summary
featureCounts	all_sections	G263_M04_sorted	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M04/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/G263_M04_featureCounts.out.summary
featureCounts	all_sections	G263_M12_sorted	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M12/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/G263_M12_featureCounts.out.summary
featureCounts	all_sections	G263_M07_sorted	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M07/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/G263_M07_featureCounts.out.summary
Picard	InsertSizeMetrics	G263_M01_primary_unique	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M01/CollectInsertSizeMetrics/G263_M01_metrics
Picard	InsertSizeMetrics	G263_M03_primary_unique	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M03/CollectInsertSizeMetrics/G263_M03_metrics
Picard	InsertSizeMetrics	G263_M11_primary_unique	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M11/CollectInsertSizeMetrics/G263_M11_metrics
Picard	InsertSizeMetrics	G263_M10_primary_unique	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M10/CollectInsertSizeMetrics/G263_M10_metrics
Picard	InsertSizeMetrics	G263_M06_primary_unique	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M06/CollectInsertSizeMetrics/G263_M06_metrics
Picard	InsertSizeMetrics	G263_M13_primary_unique	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M13/CollectInsertSizeMetrics/G263_M13_metrics
Picard	InsertSizeMetrics	G263_M09_primary_unique	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M09/CollectInsertSizeMetrics/G263_M09_metrics
Picard	InsertSizeMetrics	G263_M08_primary_unique	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M08/CollectInsertSizeMetrics/G263_M08_metrics
Picard	InsertSizeMetrics	G263_M02_primary_unique	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M02/CollectInsertSizeMetrics/G263_M02_metrics
Picard	InsertSizeMetrics	G263_M05_primary_unique	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M05/CollectInsertSizeMetrics/G263_M05_metrics
Picard	InsertSizeMetrics	G263_M04_primary_unique	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M04/CollectInsertSizeMetrics/G263_M04_metrics
Picard	InsertSizeMetrics	G263_M12_primary_unique	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M12/CollectInsertSizeMetrics/G263_M12_metrics
Picard	InsertSizeMetrics	G263_M07_primary_unique	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M07/CollectInsertSizeMetrics/G263_M07_metrics
Picard	DuplicationMetrics	G263_M01_primary_unique	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M01/CollectDuplicates/G263_M01_marked_dup_metrics.txt
Picard	DuplicationMetrics	G263_M03_primary_unique	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M03/CollectDuplicates/G263_M03_marked_dup_metrics.txt
Picard	DuplicationMetrics	G263_M11_primary_unique	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M11/CollectDuplicates/G263_M11_marked_dup_metrics.txt
Picard	DuplicationMetrics	G263_M10_primary_unique	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M10/CollectDuplicates/G263_M10_marked_dup_metrics.txt
Picard	DuplicationMetrics	G263_M06_primary_unique	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M06/CollectDuplicates/G263_M06_marked_dup_metrics.txt
Picard	DuplicationMetrics	G263_M13_primary_unique	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M13/CollectDuplicates/G263_M13_marked_dup_metrics.txt
Picard	DuplicationMetrics	G263_M09_primary_unique	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M09/CollectDuplicates/G263_M09_marked_dup_metrics.txt
Picard	DuplicationMetrics	G263_M08_primary_unique	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M08/CollectDuplicates/G263_M08_marked_dup_metrics.txt
Picard	DuplicationMetrics	G263_M02_primary_unique	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M02/CollectDuplicates/G263_M02_marked_dup_metrics.txt
Picard	DuplicationMetrics	G263_M05_primary_unique	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M05/CollectDuplicates/G263_M05_marked_dup_metrics.txt
Picard	DuplicationMetrics	G263_M04_primary_unique	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M04/CollectDuplicates/G263_M04_marked_dup_metrics.txt
Picard	DuplicationMetrics	G263_M12_primary_unique	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M12/CollectDuplicates/G263_M12_marked_dup_metrics.txt
Picard	DuplicationMetrics	G263_M07_primary_unique	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M07/CollectDuplicates/G263_M07_marked_dup_metrics.txt
Picard	RnaSeqMetrics	G263_M01_primary_unique	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M01/CollectRnaSeqMetrics/G263_M01_metrics
Picard	RnaSeqMetrics	G263_M03_primary_unique	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M03/CollectRnaSeqMetrics/G263_M03_metrics
Picard	RnaSeqMetrics	G263_M11_primary_unique	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M11/CollectRnaSeqMetrics/G263_M11_metrics
Picard	RnaSeqMetrics	G263_M10_primary_unique	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M10/CollectRnaSeqMetrics/G263_M10_metrics
Picard	RnaSeqMetrics	G263_M06_primary_unique	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M06/CollectRnaSeqMetrics/G263_M06_metrics
Picard	RnaSeqMetrics	G263_M13_primary_unique	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M13/CollectRnaSeqMetrics/G263_M13_metrics
Picard	RnaSeqMetrics	G263_M09_primary_unique	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M09/CollectRnaSeqMetrics/G263_M09_metrics
Picard	RnaSeqMetrics	G263_M08_primary_unique	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M08/CollectRnaSeqMetrics/G263_M08_metrics
Picard	RnaSeqMetrics	G263_M02_primary_unique	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M02/CollectRnaSeqMetrics/G263_M02_metrics
Picard	RnaSeqMetrics	G263_M05_primary_unique	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M05/CollectRnaSeqMetrics/G263_M05_metrics
Picard	RnaSeqMetrics	G263_M04_primary_unique	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M04/CollectRnaSeqMetrics/G263_M04_metrics
Picard	RnaSeqMetrics	G263_M12_primary_unique	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M12/CollectRnaSeqMetrics/G263_M12_metrics
Picard	RnaSeqMetrics	G263_M07_primary_unique	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M07/CollectRnaSeqMetrics/G263_M07_metrics
Samtools	flagstat	G263_M01_statistics_for_primary_reads	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M01/aligner/G263_M01_statistics_for_primary_reads.txt
Samtools	flagstat	G263_M01_statistics_for_primary_unique_reads	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M01/aligner/G263_M01_statistics_for_primary_unique_reads.txt
Samtools	flagstat	G263_M01_statistics_for_all_accepted_reads	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M01/aligner/G263_M01_statistics_for_all_accepted_reads.txt
Samtools	flagstat	G263_M03_statistics_for_primary_reads	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M03/aligner/G263_M03_statistics_for_primary_reads.txt
Samtools	flagstat	G263_M03_statistics_for_all_accepted_reads	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M03/aligner/G263_M03_statistics_for_all_accepted_reads.txt
Samtools	flagstat	G263_M03_statistics_for_primary_unique_reads	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M03/aligner/G263_M03_statistics_for_primary_unique_reads.txt
Samtools	flagstat	G263_M11_statistics_for_primary_unique_reads	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M11/aligner/G263_M11_statistics_for_primary_unique_reads.txt
Samtools	flagstat	G263_M11_statistics_for_all_accepted_reads	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M11/aligner/G263_M11_statistics_for_all_accepted_reads.txt
Samtools	flagstat	G263_M11_statistics_for_primary_reads	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M11/aligner/G263_M11_statistics_for_primary_reads.txt
Samtools	flagstat	G263_M10_statistics_for_all_accepted_reads	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M10/aligner/G263_M10_statistics_for_all_accepted_reads.txt
Samtools	flagstat	G263_M10_statistics_for_primary_unique_reads	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M10/aligner/G263_M10_statistics_for_primary_unique_reads.txt
Samtools	flagstat	G263_M10_statistics_for_primary_reads	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M10/aligner/G263_M10_statistics_for_primary_reads.txt
Samtools	flagstat	G263_M06_statistics_for_primary_reads	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M06/aligner/G263_M06_statistics_for_primary_reads.txt
Samtools	flagstat	G263_M06_statistics_for_primary_unique_reads	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M06/aligner/G263_M06_statistics_for_primary_unique_reads.txt
Samtools	flagstat	G263_M06_statistics_for_all_accepted_reads	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M06/aligner/G263_M06_statistics_for_all_accepted_reads.txt
Samtools	flagstat	G263_M13_statistics_for_all_accepted_reads	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M13/aligner/G263_M13_statistics_for_all_accepted_reads.txt
Samtools	flagstat	G263_M13_statistics_for_primary_unique_reads	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M13/aligner/G263_M13_statistics_for_primary_unique_reads.txt
Samtools	flagstat	G263_M13_statistics_for_primary_reads	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M13/aligner/G263_M13_statistics_for_primary_reads.txt
Samtools	flagstat	G263_M09_statistics_for_primary_unique_reads	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M09/aligner/G263_M09_statistics_for_primary_unique_reads.txt
Samtools	flagstat	G263_M09_statistics_for_primary_reads	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M09/aligner/G263_M09_statistics_for_primary_reads.txt
Samtools	flagstat	G263_M09_statistics_for_all_accepted_reads	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M09/aligner/G263_M09_statistics_for_all_accepted_reads.txt
Samtools	flagstat	G263_M08_statistics_for_primary_unique_reads	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M08/aligner/G263_M08_statistics_for_primary_unique_reads.txt
Samtools	flagstat	G263_M08_statistics_for_primary_reads	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M08/aligner/G263_M08_statistics_for_primary_reads.txt
Samtools	flagstat	G263_M08_statistics_for_all_accepted_reads	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M08/aligner/G263_M08_statistics_for_all_accepted_reads.txt
Samtools	flagstat	G263_M02_statistics_for_primary_reads	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M02/aligner/G263_M02_statistics_for_primary_reads.txt
Samtools	flagstat	G263_M02_statistics_for_primary_unique_reads	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M02/aligner/G263_M02_statistics_for_primary_unique_reads.txt
Samtools	flagstat	G263_M02_statistics_for_all_accepted_reads	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M02/aligner/G263_M02_statistics_for_all_accepted_reads.txt
Samtools	flagstat	G263_M05_statistics_for_all_accepted_reads	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M05/aligner/G263_M05_statistics_for_all_accepted_reads.txt
Samtools	flagstat	G263_M05_statistics_for_primary_reads	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M05/aligner/G263_M05_statistics_for_primary_reads.txt
Samtools	flagstat	G263_M05_statistics_for_primary_unique_reads	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M05/aligner/G263_M05_statistics_for_primary_unique_reads.txt
Samtools	flagstat	G263_M04_statistics_for_all_accepted_reads	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M04/aligner/G263_M04_statistics_for_all_accepted_reads.txt
Samtools	flagstat	G263_M04_statistics_for_primary_reads	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M04/aligner/G263_M04_statistics_for_primary_reads.txt
Samtools	flagstat	G263_M04_statistics_for_primary_unique_reads	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M04/aligner/G263_M04_statistics_for_primary_unique_reads.txt
Samtools	flagstat	G263_M12_statistics_for_primary_unique_reads	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M12/aligner/G263_M12_statistics_for_primary_unique_reads.txt
Samtools	flagstat	G263_M12_statistics_for_primary_reads	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M12/aligner/G263_M12_statistics_for_primary_reads.txt
Samtools	flagstat	G263_M12_statistics_for_all_accepted_reads	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M12/aligner/G263_M12_statistics_for_all_accepted_reads.txt
Samtools	flagstat	G263_M07_statistics_for_all_accepted_reads	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M07/aligner/G263_M07_statistics_for_all_accepted_reads.txt
Samtools	flagstat	G263_M07_statistics_for_primary_unique_reads	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M07/aligner/G263_M07_statistics_for_primary_unique_reads.txt
Samtools	flagstat	G263_M07_statistics_for_primary_reads	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M07/aligner/G263_M07_statistics_for_primary_reads.txt
STAR	SummaryLog	G263_M01_G263_M01	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M01/aligner/G263_M01_G263_M01_Log.final.out
STAR	SummaryLog	G263_M03_G263_M03	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M03/aligner/G263_M03_G263_M03_Log.final.out
STAR	SummaryLog	G263_M11_G263_M11	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M11/aligner/G263_M11_G263_M11_Log.final.out
STAR	SummaryLog	G263_M10_G263_M10	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M10/aligner/G263_M10_G263_M10_Log.final.out
STAR	SummaryLog	G263_M06_G263_M06	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M06/aligner/G263_M06_G263_M06_Log.final.out
STAR	SummaryLog	G263_M13_G263_M13	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M13/aligner/G263_M13_G263_M13_Log.final.out
STAR	SummaryLog	G263_M09_G263_M09	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M09/aligner/G263_M09_G263_M09_Log.final.out
STAR	SummaryLog	G263_M08_G263_M08	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M08/aligner/G263_M08_G263_M08_Log.final.out
STAR	SummaryLog	G263_M02_G263_M02	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M02/aligner/G263_M02_G263_M02_Log.final.out
STAR	SummaryLog	G263_M05_G263_M05	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M05/aligner/G263_M05_G263_M05_Log.final.out
STAR	SummaryLog	G263_M04_G263_M04	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M04/aligner/G263_M04_G263_M04_Log.final.out
STAR	SummaryLog	G263_M12_G263_M12	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M12/aligner/G263_M12_G263_M12_Log.final.out
STAR	SummaryLog	G263_M07_G263_M07	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M07/aligner/G263_M07_G263_M07_Log.final.out
STAR	ReadsPerGene	G263_M01	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M01/aligner/G263_M01_ReadsPerGene.out.tab
STAR	ReadsPerGene	G263_M03	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M03/aligner/G263_M03_ReadsPerGene.out.tab
STAR	ReadsPerGene	G263_M11	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M11/aligner/G263_M11_ReadsPerGene.out.tab
STAR	ReadsPerGene	G263_M10	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M10/aligner/G263_M10_ReadsPerGene.out.tab
STAR	ReadsPerGene	G263_M06	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M06/aligner/G263_M06_ReadsPerGene.out.tab
STAR	ReadsPerGene	G263_M13	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M13/aligner/G263_M13_ReadsPerGene.out.tab
STAR	ReadsPerGene	G263_M09	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M09/aligner/G263_M09_ReadsPerGene.out.tab
STAR	ReadsPerGene	G263_M08	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M08/aligner/G263_M08_ReadsPerGene.out.tab
STAR	ReadsPerGene	G263_M02	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M02/aligner/G263_M02_ReadsPerGene.out.tab
STAR	ReadsPerGene	G263_M05	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M05/aligner/G263_M05_ReadsPerGene.out.tab
STAR	ReadsPerGene	G263_M04	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M04/aligner/G263_M04_ReadsPerGene.out.tab
STAR	ReadsPerGene	G263_M12	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M12/aligner/G263_M12_ReadsPerGene.out.tab
STAR	ReadsPerGene	G263_M07	/projectnb/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/SAMPLES/G263_M07/aligner/G263_M07_ReadsPerGene.out.tab
fastp	all_sections	G263-M05-AAV8-TBG-CUX2-SG_R1_001	/projectnb2/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/Scripts/03_FASTQC/Job_Summary/G263_M05_FASTP/fastp.json
fastp	all_sections	G263-M07-AAV8-TBG-CUX2-SG_R1_001	/projectnb2/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/Scripts/03_FASTQC/Job_Summary/G263_M07_FASTP/fastp.json
fastp	all_sections	G263-M03-AAV8-Cas9-SG_R1_001	/projectnb2/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/Scripts/03_FASTQC/Job_Summary/G263_M03_FASTP/fastp.json
fastp	all_sections	G263-M11-Female-8wk_R1_001	/projectnb2/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/Scripts/03_FASTQC/Job_Summary/G263_M11_FASTP/fastp.json
fastp	all_sections	G263-M09-AAV8-ALB-CUX2-SG_R1_001	/projectnb2/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/Scripts/03_FASTQC/Job_Summary/G263_M09_FASTP/fastp.json
fastp	all_sections	G263-M02-AAV8-Cas9-SG_R1_001	/projectnb2/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/Scripts/03_FASTQC/Job_Summary/G263_M02_FASTP/fastp.json
fastp	all_sections	G263-M06-AAV8-TBG-CUX2-SG_R1_001	/projectnb2/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/Scripts/03_FASTQC/Job_Summary/G263_M06_FASTP/fastp.json
fastp	all_sections	G263-M04-AAV8-Cas9-SG_R1_001	/projectnb2/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/Scripts/03_FASTQC/Job_Summary/G263_M04_FASTP/fastp.json
fastp	all_sections	G263-M13-Female-8wk_R1_001	/projectnb2/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/Scripts/03_FASTQC/Job_Summary/G263_M13_FASTP/fastp.json
fastp	all_sections	G263-M12-Female-8wk_R1_001	/projectnb2/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/Scripts/03_FASTQC/Job_Summary/G263_M12_FASTP/fastp.json
fastp	all_sections	G263-M01-AAV8-Cas9-SG_R1_001	/projectnb2/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/Scripts/03_FASTQC/Job_Summary/G263_M01_FASTP/fastp.json
fastp	all_sections	G263-M10-AAV8-ALB-CUX2-SG_R1_001	/projectnb2/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/Scripts/03_FASTQC/Job_Summary/G263_M10_FASTP/fastp.json
fastp	all_sections	G263-M08-AAV8-ALB-CUX2-SG_R1_001	/projectnb2/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/Scripts/03_FASTQC/Job_Summary/G263_M08_FASTP/fastp.json
FastQC	all_sections	G263-M01-AAV8-Cas9-SG_R2_001	/projectnb2/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/Scripts/03_FASTQC/Job_Summary/G263_M01_FASTQC_R2/fastqc_data.txt
FastQC	all_sections	G263-M04-AAV8-Cas9-SG_R1_001	/projectnb2/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/Scripts/03_FASTQC/Job_Summary/G263_M04_FASTQC_R1/fastqc_data.txt
FastQC	all_sections	G263-M07-AAV8-TBG-CUX2-SG_R2_001	/projectnb2/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/Scripts/03_FASTQC/Job_Summary/G263_M07_FASTQC_R2/fastqc_data.txt
FastQC	all_sections	G263-M08-AAV8-ALB-CUX2-SG_R2_001	/projectnb2/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/Scripts/03_FASTQC/Job_Summary/G263_M08_FASTQC_R2/fastqc_data.txt
FastQC	all_sections	G263-M12-Female-8wk_R2_001	/projectnb2/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/Scripts/03_FASTQC/Job_Summary/G263_M12_FASTQC_R2/fastqc_data.txt
FastQC	all_sections	G263-M04-AAV8-Cas9-SG_R2_001	/projectnb2/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/Scripts/03_FASTQC/Job_Summary/G263_M04_FASTQC_R2/fastqc_data.txt
FastQC	all_sections	G263-M11-Female-8wk_R1_001	/projectnb2/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/Scripts/03_FASTQC/Job_Summary/G263_M11_FASTQC_R1/fastqc_data.txt
FastQC	all_sections	G263-M03-AAV8-Cas9-SG_R1_001	/projectnb2/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/Scripts/03_FASTQC/Job_Summary/G263_M03_FASTQC_R1/fastqc_data.txt
FastQC	all_sections	G263-M02-AAV8-Cas9-SG_R2_001	/projectnb2/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/Scripts/03_FASTQC/Job_Summary/G263_M02_FASTQC_R2/fastqc_data.txt
FastQC	all_sections	G263-M05-AAV8-TBG-CUX2-SG_R2_001	/projectnb2/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/Scripts/03_FASTQC/Job_Summary/G263_M05_FASTQC_R2/fastqc_data.txt
FastQC	all_sections	G263-M13-Female-8wk_R1_001	/projectnb2/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/Scripts/03_FASTQC/Job_Summary/G263_M13_FASTQC_R1/fastqc_data.txt
FastQC	all_sections	G263-M06-AAV8-TBG-CUX2-SG_R2_001	/projectnb2/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/Scripts/03_FASTQC/Job_Summary/G263_M06_FASTQC_R2/fastqc_data.txt
FastQC	all_sections	G263-M09-AAV8-ALB-CUX2-SG_R2_001	/projectnb2/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/Scripts/03_FASTQC/Job_Summary/G263_M09_FASTQC_R2/fastqc_data.txt
FastQC	all_sections	G263-M02-AAV8-Cas9-SG_R1_001	/projectnb2/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/Scripts/03_FASTQC/Job_Summary/G263_M02_FASTQC_R1/fastqc_data.txt
FastQC	all_sections	G263-M09-AAV8-ALB-CUX2-SG_R1_001	/projectnb2/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/Scripts/03_FASTQC/Job_Summary/G263_M09_FASTQC_R1/fastqc_data.txt
FastQC	all_sections	G263-M12-Female-8wk_R1_001	/projectnb2/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/Scripts/03_FASTQC/Job_Summary/G263_M12_FASTQC_R1/fastqc_data.txt
FastQC	all_sections	G263-M11-Female-8wk_R2_001	/projectnb2/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/Scripts/03_FASTQC/Job_Summary/G263_M11_FASTQC_R2/fastqc_data.txt
FastQC	all_sections	G263-M10-AAV8-ALB-CUX2-SG_R1_001	/projectnb2/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/Scripts/03_FASTQC/Job_Summary/G263_M10_FASTQC_R1/fastqc_data.txt
FastQC	all_sections	G263-M06-AAV8-TBG-CUX2-SG_R1_001	/projectnb2/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/Scripts/03_FASTQC/Job_Summary/G263_M06_FASTQC_R1/fastqc_data.txt
FastQC	all_sections	G263-M13-Female-8wk_R2_001	/projectnb2/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/Scripts/03_FASTQC/Job_Summary/G263_M13_FASTQC_R2/fastqc_data.txt
FastQC	all_sections	G263-M01-AAV8-Cas9-SG_R1_001	/projectnb2/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/Scripts/03_FASTQC/Job_Summary/G263_M01_FASTQC_R1/fastqc_data.txt
FastQC	all_sections	G263-M03-AAV8-Cas9-SG_R2_001	/projectnb2/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/Scripts/03_FASTQC/Job_Summary/G263_M03_FASTQC_R2/fastqc_data.txt
FastQC	all_sections	G263-M07-AAV8-TBG-CUX2-SG_R1_001	/projectnb2/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/Scripts/03_FASTQC/Job_Summary/G263_M07_FASTQC_R1/fastqc_data.txt
FastQC	all_sections	G263-M05-AAV8-TBG-CUX2-SG_R1_001	/projectnb2/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/Scripts/03_FASTQC/Job_Summary/G263_M05_FASTQC_R1/fastqc_data.txt
FastQC	all_sections	G263-M10-AAV8-ALB-CUX2-SG_R2_001	/projectnb2/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/Scripts/03_FASTQC/Job_Summary/G263_M10_FASTQC_R2/fastqc_data.txt
FastQC	all_sections	G263-M08-AAV8-ALB-CUX2-SG_R1_001	/projectnb2/wax-dk/max/G260_G264_RNAseq/G263_RNAseq/Scripts/03_FASTQC/Job_Summary/G263_M08_FASTQC_R1/fastqc_data.txt