Sample	total_passed	total_failed	secondary_passed	secondary_failed	supplementary_passed	supplementary_failed	duplicates_passed	duplicates_failed	mapped_passed	mapped_failed	mapped_passed_pct	mapped_failed_pct	paired in sequencing_passed	paired in sequencing_failed	read1_passed	read1_failed	read2_passed	read2_failed	properly paired_passed	properly paired_failed	properly paired_passed_pct	properly paired_failed_pct	with itself and mate mapped_passed	with itself and mate mapped_failed	singletons_passed	singletons_failed	singletons_passed_pct	singletons_failed_pct	with mate mapped to a different chr_passed	with mate mapped to a different chr_failed	with mate mapped to a different chr (mapQ >= 5)_passed	with mate mapped to a different chr (mapQ >= 5)_failed	flagstat_total
G259_M01_statistics_for_all_accepted_reads	84836120	0	6744334	0	0	0	0	0	84836120	0	100.0	nan	78091786	0	39045893	0	39045893	0	78091786	0	100.0	nan	78091786	0	0	0	0.0	nan	0	0	0	0	84836120
G259_M01_statistics_for_primary_reads	78091786	0	0	0	0	0	0	0	78091786	0	100.0	nan	78091786	0	39045893	0	39045893	0	78091786	0	100.0	nan	78091786	0	0	0	0.0	nan	0	0	0	0	78091786
G259_M01_statistics_for_primary_unique_reads	72804252	0	0	0	0	0	0	0	72804252	0	100.0	nan	72804252	0	36402126	0	36402126	0	72804252	0	100.0	nan	72804252	0	0	0	0.0	nan	0	0	0	0	72804252
G259_M02_statistics_for_all_accepted_reads	94507966	0	7002880	0	0	0	0	0	94507966	0	100.0	nan	87505086	0	43752543	0	43752543	0	87505086	0	100.0	nan	87505086	0	0	0	0.0	nan	0	0	0	0	94507966
G259_M02_statistics_for_primary_reads	87505086	0	0	0	0	0	0	0	87505086	0	100.0	nan	87505086	0	43752543	0	43752543	0	87505086	0	100.0	nan	87505086	0	0	0	0.0	nan	0	0	0	0	87505086
G259_M02_statistics_for_primary_unique_reads	82194582	0	0	0	0	0	0	0	82194582	0	100.0	nan	82194582	0	41097291	0	41097291	0	82194582	0	100.0	nan	82194582	0	0	0	0.0	nan	0	0	0	0	82194582
G259_M03_statistics_for_all_accepted_reads	75319078	0	5633398	0	0	0	0	0	75319078	0	100.0	nan	69685680	0	34842840	0	34842840	0	69685680	0	100.0	nan	69685680	0	0	0	0.0	nan	0	0	0	0	75319078
G259_M03_statistics_for_primary_reads	69685680	0	0	0	0	0	0	0	69685680	0	100.0	nan	69685680	0	34842840	0	34842840	0	69685680	0	100.0	nan	69685680	0	0	0	0.0	nan	0	0	0	0	69685680
G259_M03_statistics_for_primary_unique_reads	65448620	0	0	0	0	0	0	0	65448620	0	100.0	nan	65448620	0	32724310	0	32724310	0	65448620	0	100.0	nan	65448620	0	0	0	0.0	nan	0	0	0	0	65448620
G259_M04_statistics_for_all_accepted_reads	78974240	0	6533922	0	0	0	0	0	78974240	0	100.0	nan	72440318	0	36220159	0	36220159	0	72440318	0	100.0	nan	72440318	0	0	0	0.0	nan	0	0	0	0	78974240
G259_M04_statistics_for_primary_reads	72440318	0	0	0	0	0	0	0	72440318	0	100.0	nan	72440318	0	36220159	0	36220159	0	72440318	0	100.0	nan	72440318	0	0	0	0.0	nan	0	0	0	0	72440318
G259_M04_statistics_for_primary_unique_reads	67322424	0	0	0	0	0	0	0	67322424	0	100.0	nan	67322424	0	33661212	0	33661212	0	67322424	0	100.0	nan	67322424	0	0	0	0.0	nan	0	0	0	0	67322424
G259_M05_statistics_for_all_accepted_reads	107964118	0	9500426	0	0	0	0	0	107964118	0	100.0	nan	98463692	0	49231846	0	49231846	0	98463692	0	100.0	nan	98463692	0	0	0	0.0	nan	0	0	0	0	107964118
G259_M05_statistics_for_primary_reads	98463692	0	0	0	0	0	0	0	98463692	0	100.0	nan	98463692	0	49231846	0	49231846	0	98463692	0	100.0	nan	98463692	0	0	0	0.0	nan	0	0	0	0	98463692
G259_M05_statistics_for_primary_unique_reads	91371504	0	0	0	0	0	0	0	91371504	0	100.0	nan	91371504	0	45685752	0	45685752	0	91371504	0	100.0	nan	91371504	0	0	0	0.0	nan	0	0	0	0	91371504
G259_M06_statistics_for_all_accepted_reads	98190268	0	9192242	0	0	0	0	0	98190268	0	100.0	nan	88998026	0	44499013	0	44499013	0	88998026	0	100.0	nan	88998026	0	0	0	0.0	nan	0	0	0	0	98190268
G259_M06_statistics_for_primary_reads	88998026	0	0	0	0	0	0	0	88998026	0	100.0	nan	88998026	0	44499013	0	44499013	0	88998026	0	100.0	nan	88998026	0	0	0	0.0	nan	0	0	0	0	88998026
G259_M06_statistics_for_primary_unique_reads	82333708	0	0	0	0	0	0	0	82333708	0	100.0	nan	82333708	0	41166854	0	41166854	0	82333708	0	100.0	nan	82333708	0	0	0	0.0	nan	0	0	0	0	82333708
G259_M07_statistics_for_all_accepted_reads	69452302	0	5438130	0	0	0	0	0	69452302	0	100.0	nan	64014172	0	32007086	0	32007086	0	64014172	0	100.0	nan	64014172	0	0	0	0.0	nan	0	0	0	0	69452302
G259_M07_statistics_for_primary_reads	64014172	0	0	0	0	0	0	0	64014172	0	100.0	nan	64014172	0	32007086	0	32007086	0	64014172	0	100.0	nan	64014172	0	0	0	0.0	nan	0	0	0	0	64014172
G259_M07_statistics_for_primary_unique_reads	59993402	0	0	0	0	0	0	0	59993402	0	100.0	nan	59993402	0	29996701	0	29996701	0	59993402	0	100.0	nan	59993402	0	0	0	0.0	nan	0	0	0	0	59993402
G259_M08_statistics_for_all_accepted_reads	99613418	0	8455410	0	0	0	0	0	99613418	0	100.0	nan	91158008	0	45579004	0	45579004	0	91158008	0	100.0	nan	91158008	0	0	0	0.0	nan	0	0	0	0	99613418
G259_M08_statistics_for_primary_reads	91158008	0	0	0	0	0	0	0	91158008	0	100.0	nan	91158008	0	45579004	0	45579004	0	91158008	0	100.0	nan	91158008	0	0	0	0.0	nan	0	0	0	0	91158008
G259_M08_statistics_for_primary_unique_reads	85098830	0	0	0	0	0	0	0	85098830	0	100.0	nan	85098830	0	42549415	0	42549415	0	85098830	0	100.0	nan	85098830	0	0	0	0.0	nan	0	0	0	0	85098830
G259_M09_statistics_for_all_accepted_reads	78738500	0	7118088	0	0	0	0	0	78738500	0	100.0	nan	71620412	0	35810206	0	35810206	0	71620412	0	100.0	nan	71620412	0	0	0	0.0	nan	0	0	0	0	78738500
G259_M09_statistics_for_primary_reads	71620412	0	0	0	0	0	0	0	71620412	0	100.0	nan	71620412	0	35810206	0	35810206	0	71620412	0	100.0	nan	71620412	0	0	0	0.0	nan	0	0	0	0	71620412
G259_M09_statistics_for_primary_unique_reads	66591024	0	0	0	0	0	0	0	66591024	0	100.0	nan	66591024	0	33295512	0	33295512	0	66591024	0	100.0	nan	66591024	0	0	0	0.0	nan	0	0	0	0	66591024
G259_M10_statistics_for_all_accepted_reads	101608866	0	7471078	0	0	0	0	0	101608866	0	100.0	nan	94137788	0	47068894	0	47068894	0	94137788	0	100.0	nan	94137788	0	0	0	0.0	nan	0	0	0	0	101608866
G259_M10_statistics_for_primary_reads	94137788	0	0	0	0	0	0	0	94137788	0	100.0	nan	94137788	0	47068894	0	47068894	0	94137788	0	100.0	nan	94137788	0	0	0	0.0	nan	0	0	0	0	94137788
G259_M10_statistics_for_primary_unique_reads	88382060	0	0	0	0	0	0	0	88382060	0	100.0	nan	88382060	0	44191030	0	44191030	0	88382060	0	100.0	nan	88382060	0	0	0	0.0	nan	0	0	0	0	88382060
G259_M11_statistics_for_all_accepted_reads	78458498	0	5918412	0	0	0	0	0	78458498	0	100.0	nan	72540086	0	36270043	0	36270043	0	72540086	0	100.0	nan	72540086	0	0	0	0.0	nan	0	0	0	0	78458498
G259_M11_statistics_for_primary_reads	72540086	0	0	0	0	0	0	0	72540086	0	100.0	nan	72540086	0	36270043	0	36270043	0	72540086	0	100.0	nan	72540086	0	0	0	0.0	nan	0	0	0	0	72540086
G259_M11_statistics_for_primary_unique_reads	67842840	0	0	0	0	0	0	0	67842840	0	100.0	nan	67842840	0	33921420	0	33921420	0	67842840	0	100.0	nan	67842840	0	0	0	0.0	nan	0	0	0	0	67842840
G259_M12_statistics_for_all_accepted_reads	79038192	0	7406124	0	0	0	0	0	79038192	0	100.0	nan	71632068	0	35816034	0	35816034	0	71632068	0	100.0	nan	71632068	0	0	0	0.0	nan	0	0	0	0	79038192
G259_M12_statistics_for_primary_reads	71632068	0	0	0	0	0	0	0	71632068	0	100.0	nan	71632068	0	35816034	0	35816034	0	71632068	0	100.0	nan	71632068	0	0	0	0.0	nan	0	0	0	0	71632068
G259_M12_statistics_for_primary_unique_reads	65552598	0	0	0	0	0	0	0	65552598	0	100.0	nan	65552598	0	32776299	0	32776299	0	65552598	0	100.0	nan	65552598	0	0	0	0.0	nan	0	0	0	0	65552598
G259_M13_statistics_for_all_accepted_reads	74062108	0	5481484	0	0	0	0	0	74062108	0	100.0	nan	68580624	0	34290312	0	34290312	0	68580624	0	100.0	nan	68580624	0	0	0	0.0	nan	0	0	0	0	74062108
G259_M13_statistics_for_primary_reads	68580624	0	0	0	0	0	0	0	68580624	0	100.0	nan	68580624	0	34290312	0	34290312	0	68580624	0	100.0	nan	68580624	0	0	0	0.0	nan	0	0	0	0	68580624
G259_M13_statistics_for_primary_unique_reads	64265062	0	0	0	0	0	0	0	64265062	0	100.0	nan	64265062	0	32132531	0	32132531	0	64265062	0	100.0	nan	64265062	0	0	0	0.0	nan	0	0	0	0	64265062
G259_M14_statistics_for_all_accepted_reads	60046594	0	4068766	0	0	0	0	0	60046594	0	100.0	nan	55977828	0	27988914	0	27988914	0	55977828	0	100.0	nan	55977828	0	0	0	0.0	nan	0	0	0	0	60046594
G259_M14_statistics_for_primary_reads	55977828	0	0	0	0	0	0	0	55977828	0	100.0	nan	55977828	0	27988914	0	27988914	0	55977828	0	100.0	nan	55977828	0	0	0	0.0	nan	0	0	0	0	55977828
G259_M14_statistics_for_primary_unique_reads	52906228	0	0	0	0	0	0	0	52906228	0	100.0	nan	52906228	0	26453114	0	26453114	0	52906228	0	100.0	nan	52906228	0	0	0	0.0	nan	0	0	0	0	52906228
G259_M15_statistics_for_all_accepted_reads	86457720	0	7061228	0	0	0	0	0	86457720	0	100.0	nan	79396492	0	39698246	0	39698246	0	79396492	0	100.0	nan	79396492	0	0	0	0.0	nan	0	0	0	0	86457720
G259_M15_statistics_for_primary_reads	79396492	0	0	0	0	0	0	0	79396492	0	100.0	nan	79396492	0	39698246	0	39698246	0	79396492	0	100.0	nan	79396492	0	0	0	0.0	nan	0	0	0	0	79396492
G259_M15_statistics_for_primary_unique_reads	74215830	0	0	0	0	0	0	0	74215830	0	100.0	nan	74215830	0	37107915	0	37107915	0	74215830	0	100.0	nan	74215830	0	0	0	0.0	nan	0	0	0	0	74215830
G259_M16_statistics_for_all_accepted_reads	77719152	0	5736572	0	0	0	0	0	77719152	0	100.0	nan	71982580	0	35991290	0	35991290	0	71982580	0	100.0	nan	71982580	0	0	0	0.0	nan	0	0	0	0	77719152
G259_M16_statistics_for_primary_reads	71982580	0	0	0	0	0	0	0	71982580	0	100.0	nan	71982580	0	35991290	0	35991290	0	71982580	0	100.0	nan	71982580	0	0	0	0.0	nan	0	0	0	0	71982580
G259_M16_statistics_for_primary_unique_reads	67535974	0	0	0	0	0	0	0	67535974	0	100.0	nan	67535974	0	33767987	0	33767987	0	67535974	0	100.0	nan	67535974	0	0	0	0.0	nan	0	0	0	0	67535974