Sample fastp_mqc-generalstats-fastp-pct_duplication fastp_mqc-generalstats-fastp-after_filtering_q30_rate fastp_mqc-generalstats-fastp-after_filtering_q30_bases fastp_mqc-generalstats-fastp-after_filtering_gc_content fastp_mqc-generalstats-fastp-pct_surviving fastp_mqc-generalstats-fastp-pct_adapter FastQC_mqc-generalstats-fastqc-percent_duplicates FastQC_mqc-generalstats-fastqc-percent_gc FastQC_mqc-generalstats-fastqc-avg_sequence_length FastQC_mqc-generalstats-fastqc-percent_fails FastQC_mqc-generalstats-fastqc-total_sequences STAR_mqc-generalstats-star-uniquely_mapped_percent STAR_mqc-generalstats-star-uniquely_mapped Picard_mqc-generalstats-picard-PCT_RIBOSOMAL_BASES Picard_mqc-generalstats-picard-PCT_MRNA_BASES Picard_mqc-generalstats-picard-summed_median Picard_mqc-generalstats-picard-summed_mean Picard_mqc-generalstats-picard-PERCENT_DUPLICATION featureCounts_mqc-generalstats-featurecounts-percent_assigned featureCounts_mqc-generalstats-featurecounts-Assigned Samtools_mqc-generalstats-samtools-flagstat_total Samtools_mqc-generalstats-samtools-mapped_passed G246_M01_COMB_1 24.8306 0.973264 4091100315.0 0.486529 99.37978571810811 39.20272387933255 69.6627 49.0 150.0 36.36363636363637 15285846.0 G246_M01_COMB_2 70.4477 49.0 150.0 36.36363636363637 15285846.0 G246_M01_G246_M01 70.25 10738924.0 G246_M01_primary_unique 0.4331 86.69489999999999 276 650.505339 0.30609 G246_M01_sorted 92.69146517844804 9954066 G246_M01_statistics_for_all_accepted_reads 26561412 26561412 G246_M01_statistics_for_primary_reads 23309470 23309470 G246_M01_statistics_for_primary_unique_reads 21477848 21477848 G246_M02_COMB_1 25.0903 0.973075 5965651283.0 0.487688 99.45648895211676 44.11463899121487 70.47919999999999 49.0 150.0 36.36363636363637 22576542.0 G246_M02_COMB_2 71.2884 49.0 150.0 36.36363636363637 22576542.0 G246_M02_G246_M02 68.7 15510772.0 G246_M02_primary_unique 0.2718 86.524 269 672.635573 0.320007 G246_M02_sorted 93.08972499885886 14438935 G246_M02_statistics_for_all_accepted_reads 37992162 37992162 G246_M02_statistics_for_primary_reads 33445606 33445606 G246_M02_statistics_for_primary_unique_reads 31021544 31021544 G246_M03_COMB_1 23.6477 0.97221 4744284166.0 0.494177 99.41840833413252 43.774535933252004 69.3346 49.0 150.0 36.36363636363637 17934920.0 G246_M03_COMB_2 70.4298 50.0 150.0 36.36363636363637 17934920.0 G246_M03_G246_M03 69.65 12491427.0 G246_M03_primary_unique 0.36819999999999997 88.7908 286 732.313793 0.309364 G246_M03_sorted 94.24061798543913 11771998 G246_M03_statistics_for_all_accepted_reads 29984024 29984024 G246_M03_statistics_for_primary_reads 26720340 26720340 G246_M03_statistics_for_primary_unique_reads 24982854 24982854 G246_M04_COMB_1 27.088299999999997 0.967497 5847596271.0 0.492559 99.36943242075387 67.43174944879901 73.9676 49.0 150.0 45.45454545454545 24260207.0 G246_M04_COMB_2 72.8748 50.0 150.0 45.45454545454545 24260207.0 G246_M04_G246_M04 52.59 12758742.0 G246_M04_primary_unique 0.257 86.9158 203 527.595251 0.384795 G246_M04_sorted 92.70536233117653 11828038 G246_M04_statistics_for_all_accepted_reads 32277154 32277154 G246_M04_statistics_for_primary_reads 27726732 27726732 G246_M04_statistics_for_primary_unique_reads 25517484 25517484 G246_M05_COMB_1 27.1594 0.970764 5887986554.0 0.498269 99.39336857573467 40.76076128679415 71.8187 50.0 150.0 36.36363636363637 22150023.0 G246_M05_COMB_2 71.0802 50.0 150.0 27.27272727272727 22150023.0 G246_M05_G246_M05 74.13 16419376.0 G246_M05_primary_unique 0.2715 89.06960000000001 376 924.654566 0.364645 G246_M05_sorted 94.74343604775235 15556281 G246_M05_statistics_for_all_accepted_reads 37798418 37798418 G246_M05_statistics_for_primary_reads 34629498 34629498 G246_M05_statistics_for_primary_unique_reads 32838752 32838752 G246_M06_COMB_1 22.645599999999998 0.971666 4435016865.0 0.496305 99.41618853689755 41.68769316370107 66.9581 50.0 150.0 36.36363636363637 16766543.0 G246_M06_COMB_2 67.5935 50.0 150.0 36.36363636363637 16766543.0 G246_M06_G246_M06 72.74 12196059.0 G246_M06_primary_unique 0.3356 87.53450000000001 339 865.154012 0.315194 G246_M06_sorted 93.37534362534652 11388112 G246_M06_statistics_for_all_accepted_reads 28650634 28650634 G246_M06_statistics_for_primary_reads 25954698 25954698 G246_M06_statistics_for_primary_unique_reads 24392118 24392118 G246_M07_COMB_1 24.1371 0.969711 4859370791.0 0.49567 99.39354356802524 41.881070879656406 68.2976 49.0 150.0 36.36363636363637 18466949.0 G246_M07_COMB_2 68.8812 50.0 150.0 45.45454545454545 18466949.0 G246_M07_G246_M07 70.94 13100164.0 G246_M07_primary_unique 0.3006 86.86070000000001 325 819.845417 0.328674 G246_M07_sorted 93.07437677879452 12192896 G246_M07_statistics_for_all_accepted_reads 30877726 30877726 G246_M07_statistics_for_primary_reads 27951322 27951322 G246_M07_statistics_for_primary_unique_reads 26200328 26200328 G246_M08_COMB_1 24.0679 0.972501 3943169075.0 0.490588 99.44001194518502 39.1962411365895 67.59620000000001 49.0 150.0 36.36363636363637 14780851.0 G246_M08_COMB_2 67.9406 49.0 150.0 36.36363636363637 14780851.0 G246_M08_G246_M08 73.88 10920204.0 G246_M08_primary_unique 0.2824 87.1405 343 862.501909 0.3288 G246_M08_sorted 92.88329229014403 10143045 G246_M08_statistics_for_all_accepted_reads 25939924 25939924 G246_M08_statistics_for_primary_reads 23388004 23388004 G246_M08_statistics_for_primary_unique_reads 21840408 21840408 G246_M09_COMB_1 24.6766 0.972131 4946560308.0 0.49119 99.41628765732038 37.35380767245376 69.186 49.0 150.0 36.36363636363637 18401701.0 G246_M09_COMB_2 69.6914 49.0 150.0 36.36363636363637 18401701.0 G246_M09_G246_M09 75.41 13877432.0 G246_M09_primary_unique 0.33080000000000004 87.0817 324 819.393391 0.331092 G246_M09_sorted 93.05452190289961 12913578 G246_M09_statistics_for_all_accepted_reads 32683670 32683670 G246_M09_statistics_for_primary_reads 29644208 29644208 G246_M09_statistics_for_primary_unique_reads 27754864 27754864 G246_M10_COMB_1 22.8683 0.972241 3696207047.0 0.503786 99.44293196948 44.416110585421016 67.4941 51.0 150.0 36.36363636363637 14001701.0 G246_M10_COMB_2 68.2126 50.0 150.0 36.36363636363637 14001701.0 G246_M10_G246_M10 73.29 10261840.0 G246_M10_primary_unique 0.33409999999999995 90.9125 390 924.719324 0.31538 G246_M10_sorted 95.24984798047913 9774387 G246_M10_statistics_for_all_accepted_reads 23663042 23663042 G246_M10_statistics_for_primary_reads 21623662 21623662 G246_M10_statistics_for_primary_unique_reads 20523680 20523680 G246_M11_COMB_1 22.1976 0.97162 4489077003.0 0.492909 99.44225883862501 39.125601918458386 66.2353 50.0 150.0 36.36363636363637 16821423.0 G246_M11_COMB_2 66.6165 50.0 150.0 36.36363636363637 16821423.0 G246_M11_G246_M11 74.36 12508170.0 G246_M11_primary_unique 0.1955 86.82990000000001 311 790.783595 0.299977 G246_M11_sorted 93.175892236834 11654599 G246_M11_statistics_for_all_accepted_reads 29278660 29278660 G246_M11_statistics_for_primary_reads 26631176 26631176 G246_M11_statistics_for_primary_unique_reads 25016340 25016340 G246_M12_COMB_1 23.8248 0.972566 4493587397.0 0.492498 99.46406485617626 40.160841167949904 68.1782 49.0 150.0 36.36363636363637 16824797.0 G246_M12_COMB_2 67.8706 49.0 150.0 36.36363636363637 16824797.0 G246_M12_G246_M12 74.46 12527026.0 G246_M12_primary_unique 0.14450000000000002 87.675 327 841.473473 0.321032 G246_M12_sorted 93.40306310532125 11700626 G246_M12_statistics_for_all_accepted_reads 29412756 29412756 G246_M12_statistics_for_primary_reads 26706614 26706614 G246_M12_statistics_for_primary_unique_reads 25054052 25054052 G246_M13_COMB_1 26.0287 0.973689 6307444476.0 0.491138 99.43343591118995 40.537960754249994 69.9068 49.0 150.0 36.36363636363637 23534319.0 G246_M13_COMB_2 70.8079 49.0 150.0 36.36363636363637 23534319.0 G246_M13_G246_M13 72.85 17143836.0 G246_M13_primary_unique 0.2712 86.5136 295 764.938905 0.337095 G246_M13_sorted 93.30707549932232 15996412 G246_M13_statistics_for_all_accepted_reads 41081116 41081116 G246_M13_statistics_for_primary_reads 36788144 36788144 G246_M13_statistics_for_primary_unique_reads 34287672 34287672 G246_M14_COMB_1 23.6014 0.972881 5133420067.0 0.490662 99.46483848509328 39.55955863000113 67.9014 49.0 150.0 36.36363636363637 19168045.0 G246_M14_COMB_2 68.962 49.0 150.0 36.36363636363637 19168045.0 G246_M14_G246_M14 72.49 13894625.0 G246_M14_primary_unique 0.24420000000000003 85.5186 268 661.01805 0.304666 G246_M14_sorted 92.79520677960002 12893546 G246_M14_statistics_for_all_accepted_reads 33293514 33293514 G246_M14_statistics_for_primary_reads 29909572 29909572 G246_M14_statistics_for_primary_unique_reads 27789250 27789250 G246_M15_COMB_1 23.0498 0.972679 5841055189.0 0.493384 99.45331305362345 45.15815324151763 68.6953 49.0 150.0 36.36363636363637 22213993.0 G246_M15_COMB_2 70.0704 50.0 150.0 36.36363636363637 22213993.0 G246_M15_G246_M15 70.68 15701295.0 G246_M15_primary_unique 0.253 86.9857 275 698.912943 0.316969 G246_M15_sorted 93.38558380057187 14662746 G246_M15_statistics_for_all_accepted_reads 37369684 37369684 G246_M15_statistics_for_primary_reads 33613808 33613808 G246_M15_statistics_for_primary_unique_reads 31402590 31402590 G246_M16_COMB_1 23.2743 0.972667 5356873386.0 0.496955 99.4023286872393 43.27680204151514 68.0502 50.0 150.0 36.36363636363637 20229681.0 G246_M16_COMB_2 69.2034 50.0 150.0 36.36363636363637 20229681.0 G246_M16_G246_M16 72.47 14661253.0 G246_M16_primary_unique 0.2768 87.58200000000001 293 750.278755 0.31737 G246_M16_sorted 93.7770939496099 13748897 G246_M16_statistics_for_all_accepted_reads 34498676 34498676 G246_M16_statistics_for_primary_reads 31263248 31263248 G246_M16_statistics_for_primary_unique_reads 29322506 29322506 G246_M17_COMB_1 24.0653 0.973223 5617883304.0 0.491319 99.4352985244802 41.38024863086628 69.0378 49.0 150.0 36.36363636363637 21058206.0 G246_M17_COMB_2 70.2372 49.0 150.0 36.36363636363637 21058206.0 G246_M17_G246_M17 71.13 14979427.0 G246_M17_primary_unique 0.3673 86.68599999999999 280 707.972056 0.302086 G246_M17_sorted 93.06291221953951 13940291 G246_M17_statistics_for_all_accepted_reads 35971534 35971534 G246_M17_statistics_for_primary_reads 32193714 32193714 G246_M17_statistics_for_primary_unique_reads 29958854 29958854 G246_M18_COMB_1 22.9894 0.973032 4431675627.0 0.490425 99.4435885354778 39.32733183931709 67.1063 49.0 150.0 36.36363636363637 16516554.0 G246_M18_COMB_2 68.1829 49.0 150.0 36.36363636363637 16516554.0 G246_M18_G246_M18 73.85 12197489.0 G246_M18_primary_unique 0.2867 86.3873 281 708.420127 0.306802 G246_M18_sorted 92.89652157095612 11331043 G246_M18_statistics_for_all_accepted_reads 29067432 29067432 G246_M18_statistics_for_primary_reads 26188118 26188118 G246_M18_statistics_for_primary_unique_reads 24394978 24394978 G246_M19_COMB_1 24.778200000000002 0.972442 4790966509.0 0.49915 99.47898472816195 40.02916955030787 71.6709 50.0 150.0 36.36363636363637 17960510.0 G246_M19_COMB_2 72.515 50.0 150.0 36.36363636363637 17960510.0 G246_M19_G246_M19 73.01 13113427.0 G246_M19_primary_unique 0.4396 89.9894 346 863.625987 0.33345 G246_M19_sorted 93.6352564436436 12278791 G246_M19_statistics_for_all_accepted_reads 30961760 30961760 G246_M19_statistics_for_primary_reads 28060770 28060770 G246_M19_statistics_for_primary_unique_reads 26226854 26226854 G246_M20_COMB_1 24.424 0.972633 5026909118.0 0.491341 99.46480208185748 38.58403583505598 69.0656 49.0 150.0 36.36363636363637 18746336.0 G246_M20_COMB_2 69.856 49.0 150.0 36.36363636363637 18746336.0 G246_M20_G246_M20 72.95 13675845.0 G246_M20_primary_unique 0.30179999999999996 87.1578 317 815.953247 0.321247 G246_M20_sorted 93.06405563970635 12727296 G246_M20_statistics_for_all_accepted_reads 32909914 32909914 G246_M20_statistics_for_primary_reads 29436028 29436028 G246_M20_statistics_for_primary_unique_reads 27351690 27351690 G246_M21_COMB_1 31.516499999999997 0.972738 8724940596.0 0.486619 99.47339785635447 48.11373680937117 76.5273 49.0 150.0 36.36363636363637 33284141.0 G246_M21_COMB_2 76.4514 49.0 150.0 36.36363636363637 33284141.0 G246_M21_G246_M21 64.57 21492657.0 G246_M21_primary_unique 0.30010000000000003 86.4252 238 593.146656 0.398664 G246_M21_sorted 92.8790981961886 19962186 G246_M21_statistics_for_all_accepted_reads 54251150 54251150 G246_M21_statistics_for_primary_reads 46790994 46790994 G246_M21_statistics_for_primary_unique_reads 42985314 42985314 G246_M22_COMB_1 27.2783 0.972033 5131853640.0 0.482529 99.42517831468462 47.78177544312901 73.0862 48.0 150.0 36.36363636363637 19664533.0 G246_M22_COMB_2 73.1525 49.0 150.0 36.36363636363637 19664533.0 G246_M22_G246_M22 62.35 12261400.0 G246_M22_primary_unique 0.3147 85.3822 244 586.986304 0.333205 G246_M22_sorted 91.94076532859216 11273225 G246_M22_statistics_for_all_accepted_reads 31567720 31567720 G246_M22_statistics_for_primary_reads 26937614 26937614 G246_M22_statistics_for_primary_unique_reads 24522800 24522800 G246_M23_COMB_1 28.782400000000003 0.973727 5273418137.0 0.477455 99.46267673960301 43.209021222255856 72.8035 48.0 150.0 36.36363636363637 19846712.0 G246_M23_COMB_2 73.1856 48.0 150.0 36.36363636363637 19846712.0 G246_M23_G246_M23 65.62 13023509.0 G246_M23_primary_unique 0.2245 83.4435 249 580.260815 0.346447 G246_M23_sorted 90.6558055897224 11806567 G246_M23_statistics_for_all_accepted_reads 33411206 33411206 G246_M23_statistics_for_primary_reads 28706170 28706170 G246_M23_statistics_for_primary_unique_reads 26047018 26047018 G246_M24_COMB_1 26.429799999999997 0.973897 5773642802.0 0.487067 99.50075458913604 42.5955920856676 69.9373 49.0 150.0 36.36363636363637 21691937.0 G246_M24_COMB_2 70.3499 49.0 150.0 36.36363636363637 21691937.0 G246_M24_G246_M24 71.87 15590892.0 G246_M24_primary_unique 0.16949999999999998 85.5156 275 694.309527 0.342785 G246_M24_sorted 92.20247949892796 14375189 G246_M24_statistics_for_all_accepted_reads 37449112 37449112 G246_M24_statistics_for_primary_reads 33607036 33607036 G246_M24_statistics_for_primary_unique_reads 31181784 31181784 G246_M25_COMB_1 30.457800000000002 0.974281 7418957734.0 0.479841 99.46621181272242 40.86484786636603 74.6584 48.0 150.0 36.36363636363637 27620881.0 G246_M25_COMB_2 73.5198 48.0 150.0 36.36363636363637 27620881.0 G246_M25_G246_M25 71.97 19879834.0 G246_M25_primary_unique 0.1673 85.6711 278 719.384014 0.376961 G246_M25_sorted 91.9713917128282 18283760 G246_M25_statistics_for_all_accepted_reads 48457304 48457304 G246_M25_statistics_for_primary_reads 43087684 43087684 G246_M25_statistics_for_primary_unique_reads 39759668 39759668 G246_M26_COMB_1 25.6002 0.973188 5270782927.0 0.485641 99.42077678805556 41.26033516026378 69.6756 48.0 150.0 36.36363636363637 19769408.0 G246_M26_COMB_2 70.1738 49.0 150.0 36.36363636363637 19769408.0 G246_M26_G246_M26 72.02 14237862.0 G246_M26_primary_unique 0.1917 85.9987 290 742.047521 0.332959 G246_M26_sorted 92.61773993876328 13186786 G246_M26_statistics_for_all_accepted_reads 34252846 34252846 G246_M26_statistics_for_primary_reads 30673696 30673696 G246_M26_statistics_for_primary_unique_reads 28475724 28475724 G246_M27_COMB_1 25.2683 0.973481 5395736799.0 0.494398 99.47840691551734 42.42011041693408 69.751 50.0 150.0 36.36363636363637 20271166.0 G246_M27_COMB_2 69.8378 50.0 150.0 36.36363636363637 20271166.0 G246_M27_G246_M27 73.22 14843350.0 G246_M27_primary_unique 0.17229999999999998 87.49719999999999 307 812.619973 0.34082 G246_M27_sorted 93.40661643092699 13864671 G246_M27_statistics_for_all_accepted_reads 35110006 35110006 G246_M27_statistics_for_primary_reads 31724180 31724180 G246_M27_statistics_for_primary_unique_reads 29686700 29686700 G246_M28_COMB_1 28.7031 0.974811 4673391032.0 0.49456 99.55385693381133 59.20873103433766 74.4182 50.0 150.0 36.36363636363637 18441618.0 G246_M28_COMB_2 71.85640000000001 50.0 150.0 36.36363636363637 18441618.0 G246_M28_G246_M28 64.26 11851317.0 G246_M28_primary_unique 0.17570000000000002 88.1776 295 788.838055 0.410488 G246_M28_sorted 93.20505054417158 11046026 G246_M28_statistics_for_all_accepted_reads 28750314 28750314 G246_M28_statistics_for_primary_reads 25495734 25495734 G246_M28_statistics_for_primary_unique_reads 23702634 23702634 G246_M29_COMB_1 29.4346 0.975118 6097299604.0 0.471115 99.50439367400918 46.81866868179896 75.6721 47.0 150.0 36.36363636363637 23473066.0 G246_M29_COMB_2 73.2942 48.0 150.0 36.36363636363637 23473066.0 G246_M29_G246_M29 65.96 15484005.0 G246_M29_primary_unique 0.2376 84.69489999999999 264 726.928452 0.396478 G246_M29_sorted 90.54451351572155 14019917 G246_M29_statistics_for_all_accepted_reads 37982548 37982548 G246_M29_statistics_for_primary_reads 33790706 33790706 G246_M29_statistics_for_primary_unique_reads 30968010 30968010 G246_M30_COMB_1 27.883000000000003 0.972915 4505297794.0 0.47821 99.48369314934264 47.521762957264734 75.4399 48.0 150.0 36.36363636363637 17577919.0 G246_M30_COMB_2 72.5714 49.0 150.0 45.45454545454545 17577919.0 G246_M30_G246_M30 62.89 11055233.0 G246_M30_primary_unique 0.36879999999999996 86.4077 268 725.150096 0.374581 G246_M30_sorted 91.49972687142822 10115508 G246_M30_statistics_for_all_accepted_reads 27455786 27455786 G246_M30_statistics_for_primary_reads 24221210 24221210 G246_M30_statistics_for_primary_unique_reads 22110466 22110466 G246_M31_COMB_1 25.3888 0.973373 5532859419.0 0.486153 99.46199028796852 35.454958273158155 70.4564 49.0 150.0 36.36363636363637 20634200.0 G246_M31_COMB_2 70.3723 49.0 150.0 36.36363636363637 20634200.0 G246_M31_G246_M31 74.09 15287255.0 G246_M31_primary_unique 0.46849999999999997 86.455 323 833.0657619999998 0.338043 G246_M31_sorted 92.74408649558079 14178025 G246_M31_statistics_for_all_accepted_reads 36224638 36224638 G246_M31_statistics_for_primary_reads 32760440 32760440 G246_M31_statistics_for_primary_unique_reads 30574510 30574510