FastQCFastQC Report
Wed 13 Sep 2023
SRR12649918_pass.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR12649918_pass.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences24574823
Sequences flagged as poor quality0
Sequence length35-50
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCCCCTTCGCAGTAACACCAAGTACAGGAATATTAACCTGTTTCCCATC7241132.9465644574530607No Hit
CTTCGCAGTAACACCAAGTACAGGAATATTAACCTGTTTCCCATCGACT6026952.4524896883285794No Hit
CTCCATCAGGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTC5782062.3528389197350474No Hit
CCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT5600982.279153750161293No Hit
CCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTG4929382.0058659222082698No Hit
CCTCCATCAGGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTC4891951.9906348867700898No Hit
GTCAGCATTCGCACTTCTGATACCTCCAGCATGCCTCACAGCACACCTTC4417811.7976975866723435No Hit
CCCCTTCGCAGTAACACCAAGTACAGGAATATTAACCTGTTTCCCATCG3782581.5392094583956921No Hit
CCCACGCTTTCGCACCTGAGCGTCAGTCTTCGTCCAGGGGGCCGCCTTCG3625161.4751520285619146No Hit
CCACGCTTTCGCACCTGAGCGTCAGTCTTCGTCCAGGGGGCCGCCTTCGC2602911.0591775167617687No Hit
CCCCCTTCGCAGTAACACCAAGTACAGGAATATTAACCTGTTTCCCATCG2580001.0498549674192974No Hit
CCCCGGTTCGCCTCATTAACCTATGGATTCAGTTAATGATAGTGTGTCG2227780.906529418340063No Hit
CACCGGTATTCCTCCAGATCTCTACGCATTTCACCGCTACACCTGGAATT2212540.900327949462749No Hit
CTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCG2181220.8875831984629147No Hit
CCCCCCTCTACGAGACTCAAGCTTGCCAGTATCAGATGCAGTTCCCAGGT2162100.8798028779291718No Hit
CGTCAATTCATTTGAGTTTTAACCTTGCGGCCGTACTCCCCAGGCGGTCG2123900.8642585136828859No Hit
CCCATATTCAGACAGGATACCACGTGTCCCGCCCTACTCATCGAGCTCAC2055330.8363559729402731No Hit
GTCCCCCCTTCGCAGTAACACCAAGTACAGGAATATTAACCTGTTTCCC1900720.7734419897958167No Hit
TTCCGATTAACGCTTGCACCCTCCGTATTACCGCGGCTGCTGGCACGG1756760.7148617102959399No Hit
CTCCGTCCCCCCTTCGCAGTAACACCAAGTACAGGAATATTAACCTGTTT1729890.7039277556546388No Hit
ATTCCGATTAACGCTTGCACCCTCCGTATTACCGCGGCTGCTGGCACGG1657640.6745277473615985No Hit
CCCGGTTCGCCTCATTAACCTATGGATTCAGTTAATGATAGTGTGTCGA1622240.6601227605993337No Hit
CCAGTAATTCCGATTAACGCTTGCACCCTCCGTATTACCGCGGCTGCTGG1467230.5970460092428743No Hit
CTTCGCCACCGGTATTCCTCCAGATCTCTACGCATTTCACCGCTACACCT1383790.5630925602190502No Hit
CTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTG1249290.5083617489330442No Hit
CTCTACGAGACTCAAGCTTGCCAGTATCAGATGCAGTTCCCAGGTTGAGC1175080.47816417640118913No Hit
CCGGTATTCCTCCAGATCTCTACGCATTTCACCGCTACACCTGGAATTCT1157850.4711529356691602No Hit
CAGTAATTCCGATTAACGCTTGCACCCTCCGTATTACCGCGGCTGCTGGC1153330.46931365487352644No Hit
CCCAGTAATTCCGATTAACGCTTGCACCCTCCGTATTACCGCGGCTGCTG1117450.45471334625685805No Hit
CCCGTCAATTCATTTGAGTTTTAACCTTGCGGCCGTACTCCCCAGGCGGT1042810.42434079789709983No Hit
CGGTATTCCTCCAGATCTCTACGCATTTCACCGCTACACCTGGAATTCT896260.3647065942245037No Hit
CGGGAACGTATTCACCGTGGCATTCTGATCCACGATTACTAGCGATTCCG888510.3615529601169457No Hit
CCGATTAACGCTTGCACCCTCCGTATTACCGCGGCTGCTGGCACGGAGTT847330.3447959726912377No Hit
CTTCCGGCGAGCGGGCTTTTCACCCGCTTTATCGTTACTTATGTCAGCAT833860.33931475315203696No Hit
CTTGGTCTTCCGGCGAGCGGGCTTTTCACCCGCTTTATCGTTACTTATGT806930.3283563832789355No Hit
CTCAGTTCTCCAGCGCCCACGGCAGATAGGGACCGAACTGTCTCACGACG794180.3231681465213401No Hit
CTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGG790370.3216177793020117No Hit
CGATTAACGCTTGCACCCTCCGTATTACCGCGGCTGCTGGCACGGAGTT776890.31613249055751086No Hit
CTCCATCAGGCAGCTTCCCAGACATTACTCACCCGTCCGCCACTCGTC775360.31550990214659935No Hit
CCTTGGTCTTCCGGCGAGCGGGCTTTTCACCCGCTTTATCGTTACTTATG773530.3147652375766857No Hit
CCCCACGCTTTCGCACCTGAGCGTCAGTCTTCGTCCAGGGGGCCGCCTTC741440.3017071577687457No Hit
GTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCG736060.2995179253173054No Hit
GGTCAGTCAGGAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGAC735990.2994894408802049No Hit
CCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGG717340.2919003729955654No Hit
CACCCGTCCGCCACTCGTCAGCAAAGAAGCAAGCTTCTTCCTGTTACCGT694170.2824720243152921No Hit
CTCCGTATTACCGCGGCTGCTGGCACGGAGTTAGCCGGTGCTTCTTCTGC689990.2807710964998609No Hit
CACGCTTTCGCACCTGAGCGTCAGTCTTCGTCCAGGGGGCCGCCTTCGCC680800.2770314968290921No Hit
CAGCATTCGCACTTCTGATACCTCCAGCATGCCTCACAGCACACCTTCGC665260.27070795179277585No Hit
CCCCTCCATCAGGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGT638010.25961936735007207No Hit
GTCAATTCATTTGAGTTTTAACCTTGCGGCCGTACTCCCCAGGCGGTCG629950.25633958787821176No Hit
CTACGAGACTCAAGCTTGCCAGTATCAGATGCAGTTCCCAGGTTGAGCCC625850.25467121370518114No Hit
CCCTTCGCAGTAACACCAAGTACAGGAATATTAACCTGTTTCCCATCGAC621160.25276275641944607No Hit
CTCCCTTCCTCCCCGCTGAAAGTACTTTACAACCCGAAGGCCTTCTTCAT620570.2525226733067416No Hit
CACCGCTACACCTGGAATTCTACCCCCCTCTACGAGACTCAAGCTTGCC619900.2522500365516366No Hit
AGTAATTCCGATTAACGCTTGCACCCTCCGTATTACCGCGGCTGCTGGC603250.24547480972701208No Hit
CCCCCATATTCAGACAGGATACCACGTGTCCCGCCCTACTCATCGAGCTC602520.2451777577401066No Hit
GGAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAGGATACC599800.24407093389848628No Hit
GTCAGCATTCGCACTTCTGATACCTCCAGCATACCTCACAGTACACCTTC593030.24131608191033566No Hit
CTTCTCCGTCCCCCCTTCGCAGTAACACCAAGTACAGGAATATTAACCTG570310.2320708474685657No Hit
CCTCCATCAGGCAGCTTCCCAGACATTACTCACCCGTCCGCCACTCGTC549630.22365573090801102No Hit
ATTCATTTGAGTTTTAACCTTGCGGCCGTACTCCCCAGGCGGTCGACTT547180.2226587756094927No Hit
CCCTCCATCAGGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTC546300.22230068554308613No Hit
GCCTTCGCCACCGGTATTCCTCCAGATCTCTACGCATTTCACCGCTACAC541420.2203149133566496No Hit
CCTGCTTTCGCACCTGCTCGCGCCGTCACGCTCGCAGTCAAGCTGGCTT531150.2161358395134728No Hit
GCGCCATTGTAGCACGTGTGTAGCCCTGGTCGTAAGGGCCATGATGACTT523460.21300662063771528No Hit
GCCACCGGTATTCCTCCAGATCTCTACGCATTTCACCGCTACACCTGGA522680.21268922262430945No Hit
CAGGAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAGGATAC515300.20968614911285427No Hit
CGCCATTGTAGCACGTGTGTAGCCCTGGTCGTAAGGGCCATGATGACTTG511560.20816426633062626No Hit
GTCAGTCAGGAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGAC504960.2054785908325769No Hit
GCTCCCCACGCTTTCGCACCTGAGCGTCAGTCTTCGTCCAGGGGGCCGCC499120.2031021749373332No Hit
CCGGGAACGTATTCACCGTGGCATTCTGATCCACGATTACTAGCGATTCC498410.2028132613610279No Hit
ACCGGTATTCCTCCAGATCTCTACGCATTTCACCGCTACACCTGGAATTC497010.20224357261901743No Hit
GTACGATTTGATGTTACCTGATGCTTAGAGGCTTTTCCTGGAAGCAGGGC480860.19567180605939666No Hit
CGGGGATTTCACATCTGACTTAACAAACCGCCTGCGTGCGCTTTACGCCC472980.19246527228293772No Hit
CTTTGGTTTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTAT459190.18685383817413456No Hit
CTGGTCGTAAGGGCCATGATGACTTGACGTCATCCCCACCTTCCTCCAGT457020.18597082062401832No Hit
CACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGC449190.18278463287405977No Hit
CTCCCCACGCTTTCGCACCTGAGCGTCAGTCTTCGTCCAGGGGGCCGCCT441030.17946416134919874No Hit
CTGGCTGTCTGGGCCTTCCCACATCGTTTCCCACTTAACCATGACTTTGG440740.17934615439549656No Hit
CCGCCTTCGCCACCGGTATTCCTCCAGATCTCTACGCATTTCACCGCTAC438150.17829223022277718No Hit
GTTACATCTTCCGCGCAGGCCGACTCGACCAGTGAGCTATTACGCTTTCT436870.1777713719443676No Hit
CCATCAGGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGC431730.17567980042012915No Hit
CTCTTCACGACGGACGTTAGCACCCGCCGTGTGTCTCCCGTGATAACATT430150.17503686598271737No Hit
CTCGGTACTACATGCTTAGTCAGTCTTTACATTCGCTTGCCAGCTGCGG422220.17180998617975804No Hit
GTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCT414060.168489514654897No Hit
CGCAGTAACACCAAGTACAGGAATATTAACCTGTTTCCCATCGACTACGC399780.1626786894863902No Hit
CCGGGTTTCGGGTCTATACCCTGCAACTTAACGCCCAGTTAAGACTCGGT397510.16175497988327323No Hit
CACCCGTCCGCCACTCGTCAGCGAAACAGCAAGCTGTTTCCTGTTACCGT388190.1579624805436035No Hit
GATTAACGCTTGCACCCTCCGTATTACCGCGGCTGCTGGCACGGAGTT385570.1568963487549839No Hit
CTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATT380090.15466642425054292No Hit
CGAGACTCAAGCTTGCCAGTATCAGATGCAGTTCCCAGGTTGAGCCCGGG375760.15290445835561053No Hit
CTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCG374160.15225338550759857No Hit
CGCTACACCTGGAATTCTACCCCCCTCTACGAGACTCAAGCTTGCCAGT372650.15163893550728727No Hit
CAGGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCAA372400.1515372053747854No Hit
GTCGGTTTGGGGTACGATTTGATGTTACCTGATGCTTAGAGGCTTTTCCT364970.14851378583682984No Hit
CTGCTTTCGCACCTGCTCGCGCCGTCACGCTCGCAGTCAAGCTGGCTTAT361860.14724826298850657No Hit
CATCAGGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCA359090.14612109312038585No Hit
ATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTC356690.1451444838483679No Hit
CGGGTTTCGGGTCTATACCCTGCAACTTAACGCCCAGTTAAGACTCGGTT355810.14478639378196131No Hit
CCCCGCTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT355010.14446085735795533No Hit
CCATATTCAGACAGGATACCACGTGTCCCGCCCTACTCATCGAGCTCAC354520.14426146629825168No Hit
CCCCTCTACGAGACTCAAGCTTGCCAGTATCAGATGCAGTTCCCAGGTTG351100.14286979808562608No Hit
GTGCTTCTTCTGCGGGTAACGTCAATGAGCAAAGGTATTAACTTTACTCC348090.14164496729030357No Hit
TCCGATTAACGCTTGCACCCTCCGTATTACCGCGGCTGCTGGCACGGAGT346620.14104679411119259No Hit
CTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTT342760.13947608086536373No Hit
GTCAGGAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAGGAT340380.1385076100039459No Hit
CCCCCCTCCATCAGGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTC338180.13761238483792945No Hit
GGCATTTGTTGCTTCAGCACCGTAGTGCCTCGTCATCACGCCTCAGCCTT337200.13721360271852212No Hit
CCTCAGTTCTCCAGCGCCCACGGCAGATAGGGACCGAACTGTCTCACGAC335730.13661542953941114No Hit
ACGAGACTCAAGCTTGCCAGTATCAGATGCAGTTCCCAGGTTGAGCCCGG333040.135520813313691No Hit
CCCTCTACGAGACTCAAGCTTGCCAGTATCAGATGCAGTTCCCAGGTTG332020.13510575437308336No Hit
CGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTC331840.13503250867768204No Hit
CTGGGTTGTTTCCCTCTTCACGACGGACGTTAGCACCCGCCGTGTGTCTC328910.1338402315247601No Hit
CCCCATATTCAGACAGGATACCACGTGTCCCGCCCTACTCATCGAGCTC326810.1329856984117444No Hit
CCGCTTTATCGTTACTTATGTCAGCATTCGCACTTCTGATACCTCCAGC322890.1313905699341151No Hit
CTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTAT322720.13132139344401383No Hit
ATTAACGCTTGCACCCTCCGTATTACCGCGGCTGCTGGCACGGAGTTAGC321380.1307761199338038No Hit
GCCCAGTAATTCCGATTAACGCTTGCACCCTCCGTATTACCGCGGCTGCT320190.1302918845030949No Hit
CCTTCCTCCCCGCTGAAAGTACTTTACAACCCGAAGGCCTTCTTCATAC316990.12898973880707096No Hit
CCCACATCGTTTCCCACTTAACCATGACTTTGGGACCTTAGCTGGCGGTC316850.12893276993286992No Hit
ATTCAGACAGGATACCACGTGTCCCGCCCTACTCATCGAGCTCACAGCAT316370.12873744807846632No Hit
GTGCGCTTTACGCCCAGTAATTCCGATTAACGCTTGCACCCTCCGTATT314360.1279195378131513No Hit
CGCCTTTCCCTCACGGTACTGGTTCACTATCGGTCAGTCAGGAGTATTT314180.12784629211774995No Hit
GCCCCCCTTCGCAGTAACACCAAGTACAGGAATATTAACCTGTTTCCCAT310210.12623081761362026No Hit
CTCACGGTTCATTAGTACCGGTTAGCTCAACGCATCGCTGCGCTTACAC306390.12467638118899167No Hit
CTTTCCCTCACGGTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCC303990.12369977191697373No Hit
CTGAGCGTCAGTCTTCGTCCAGGGGGCCGCCTTCGCCACCGGTATTCCTC296780.1207658748956198No Hit
CACCTGTGTCGGTTTGGGGTACGATTTGATGTTACCTGATGCTTAGAGGC295440.12022060138540977No Hit
CCGGTTCGCCTCATTAACCTATGGATTCAGTTAATGATAGTGTGTCGAA292470.11901204741128756No Hit
GTTCGCCTCATTAACCTATGGATTCAGTTAATGATAGTGTGTCGAAACAC289760.1179092927749673No Hit
CACGTGTGTAGCCCTGGTCGTAAGGGCCATGATGACTTGACGTCATCCCC276020.11231820469266451No Hit
CTCTTTGGTTTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTT275730.11220019773896235No Hit
CTGGAATTCTACCCCCCTCTACGAGACTCAAGCTTGCCAGTATCAGATGC273110.11113406595034275No Hit
CCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTC272870.11103640502314095No Hit
GATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCT271530.11049113151293094No Hit
CACGGAGTTAGCCGGTGCTTCTTCTGCGGGTAACGTCAATGAGCAAAGGT271350.11041788581752959No Hit
GTCCGCCACTCGTCAGCAAAGAAGCAAGCTTCTTCCTGTTACCGTTCGAC269220.10955114508861366No Hit
GTAATTCCGATTAACGCTTGCACCCTCCGTATTACCGCGGCTGCTGGCAC267880.10900587157840363No Hit
CCTGGCTGTCTGGGCCTTCCCACATCGTTTCCCACTTAACCATGACTTTG266910.10861115866429638No Hit
GTCGGTTCGGTCCTCCAGTTAGTGTTACCCAACCTTCAACCTGCCCATGG266670.10851349773709458No Hit
CCTTCGCAGTAACACCAAGTACAGGAATATTAACCTGTTTCCCATCGACT265130.10788684012088307No Hit
CCCCCTCCATCAGGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCG257820.10491225104652839No Hit
GCCTTCTCCGTCCCCCCTTCGCAGTAACACCAAGTACAGGAATATTAACC256400.10433442389391778No Hit
CCTGGTCGTAAGGGCCATGATGACTTGACGTCATCCCCACCTTCCTCC255080.1037972887943079No Hit
CGCCCAGTAATTCCGATTAACGCTTGCACCCTCCGTATTACCGCGGCTGC254650.10362231296640469No Hit
ATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAGGATACCACGTGT248530.10113195932275891No Hit
CTCCAGATCTCTACGCATTTCACCGCTACACCTGGAATTCTACCCCCCTC247890.10087153018355413No Hit
CCCCGCTGAAAGTACTTTACAACCCGAAGGCCTTCTTCATACACGCGGC247560.10073724640865164No Hit
GACCTGCTTTCGCACCTGCTCGCGCCGTCACGCTCGCAGTCAAGCTGGCT247130.10056227058074843No Hit
ACCTGCTTTCGCACCTGCTCGCGCCGTCACGCTCGCAGTCAAGCTGGCTT247100.10055006296484821No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)