FastQCFastQC Report
Fri 10 Jun 2022
SRR17262572_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR17262572_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences29698819
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CACGATCACAAGAAAGACGTGGTCCTGACAGACAGACAATCCTATTCCCT622690.20966826997396767No Hit
CCACGATCACAAGAAAGACGTGGTCCTGACAGACAGACAATCCTATTCCC528020.17779158154403377No Hit
GCCACGATCACAAGAAAGACGTGGTCCTGACAGACAGACAATCCTATTCC392770.13225105011751476No Hit
CCCCACTAGCCTCTGGCAAAATGAAGTGGGTAACCTTTCTCCTCCTCCTC384340.12941255340826854No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)