FastQCFastQC Report
Mon 20 Jun 2022
SRR13762417_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR13762417_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21872963
Sequences flagged as poor quality0
Sequence length151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCGGAAGAGCACACGTCTGAACTCCAGTCACGGCTTAAGATCTCGTATG1127360.5154125666467776TruSeq Adapter, Index 11 (97% over 36bp)
CTCGAATGTGTGATATGGTGGAGGGCAGCCATGAAGTCATTCTAAATTTG1048050.47915319017364044No Hit
CTTTTCTACATTAAAGTTCCTTCCCGTAGAACTAGCTTCTTCTGCATGGA986780.45114143886221547No Hit
CTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTCAC556490.2544191200798904No Hit
CAGGATAATAGTATGCCATTCCCCATTAATCTTTTCTACATTAAAGTTCC492310.22507695916643755No Hit
ATCGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCAC440410.20134903533645626No Hit
CAGCCTTTTCTGTTTTGTCAGCAACCATAGATAATTCGGAGCACTCTTCA428280.19580337606752227No Hit
GTCGGCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAGGAGAGG350470.16022977773976027No Hit
CTTTTCGTTAATGAGATGAGCCATAAGAAAGTTATCATAGTCTGTCTTAG326980.1494904919831849No Hit
CGCGTAACTAGTTAGCATGCCAGAGTCTCGTTCGTTATCGGAATTAACCA308250.14092740887460012No Hit
CAGAATATTCACCAGCCTTTTCTGTTTTGTCAGCAACCATAGATAATTCG305410.1396290022526898No Hit
CGGGCCTGGAGGCAGCGATTGGCATTGGATAGGTCAATGATATTTTCTCT293270.13407877112945327No Hit
CTTTTCTGTTTTGTCAGCAACCATAGATAATTCGGAGCACTCTTCATCTC263470.12045464530799967No Hit
CCAGCCTTTTCTGTTTTGTCAGCAACCATAGATAATTCGGAGCACTCTTC260240.11897793636829175No Hit
AAGAAAGTTATCATAGTCTGTCTTAGGTATAGTAAATGTATTGAATCCAT249380.11401290259577543No Hit
GCCTTTTCTGTTTTGTCAGCAACCATAGATAATTCGGAGCACTCTTCATC246660.1127693582254951No Hit
CTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCAACTAAGAAC234140.10704539663876358No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)