FastQCFastQC Report
Mon 20 Jun 2022
SRR13762416_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR13762416_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20601215
Sequences flagged as poor quality0
Sequence length151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTCACCCGGCCCGGACACGGACAGGATTGACAGATTGATAGCTCTTTCT2042100.9912522149785826No Hit
CACGATCACAAGAAAGACGTGGTCCTGACAGACAGACAATCCTATTCCCT1815350.8811858912204935No Hit
GAAAGACGTGGTCCTGACAGACAGACAATCCTATTCCCTACCAAAATGAA1401430.6802657027752974No Hit
CGATCACAAGAAAGACGTGGTCCTGACAGACAGACAATCCTATTCCCTAC1140550.5536323949825289No Hit
CAAGAAAGACGTGGTCCTGACAGACAGACAATCCTATTCCCTACCAAAAT996680.48379670810677916No Hit
CTCACCCGGCCCGGACACGGACAGGATTGACAGATTGATAGCTCTTTCTC992210.4816269331687476No Hit
AAGAAAGACGTGGTCCTGACAGACAGACAATCCTATTCCCTACCAAAATG802540.3895595478227862No Hit
CCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAG781730.3794582018584826No Hit
CACAAGAAAGACGTGGTCCTGACAGACAGACAATCCTATTCCCTACCAAA656600.318719065841505No Hit
AAAGACGTGGTCCTGACAGACAGACAATCCTATTCCCTACCAAAATGAAG622340.30208897873256507No Hit
AAGACGTGGTCCTGACAGACAGACAATCCTATTCCCTACCAAAATGAAGA583080.28303185030591643No Hit
AGAAAGACGTGGTCCTGACAGACAGACAATCCTATTCCCTACCAAAATGA573560.27841076363699907No Hit
CTAGCCTCTGGCAAAATGAAGTGGGTAACCTTTCTCCTCCTCCTCTTCGT564130.2738333637118005No Hit
CTCTGGCAAAATGAAGTGGGTAACCTTTCTCCTCCTCCTCTTCGTCTCCG373780.18143590074663074No Hit
CCCCACTAGCCTCTGGCAAAATGAAGTGGGTAACCTTTCTCCTCCTCCTC372230.18068351793814103No Hit
CTTTAATGTAGAAAAGATTAATGGGGAATGGCATACTATTATCCTGGCCT341650.16583973323903467No Hit
CGTGGTCCTGACAGACAGACAATCCTATTCCCTACCAAAATGAAGATGCT337720.16393207876331564No Hit
CCACGATCACAAGAAAGACGTGGTCCTGACAGACAGACAATCCTATTCCC327770.15910226654107537No Hit
CACCCGGCCCGGACACGGACAGGATTGACAGATTGATAGCTCTTTCTCGA289570.140559670873781No Hit
CGGAGAGCTCCGGGGAGGTCACCCACACCCTTCAGGATGAAAGCTGTGGT287360.13948691861135376No Hit
GACGTGGTCCTGACAGACAGACAATCCTATTCCCTACCAAAATGAAGATG281240.1365162200384783No Hit
CTCAACCAATCACAAAGATATCGGAACCCTCTATCTACTATTCGGAGCCT279710.13577354539525946No Hit
CACCCAGCTCTGGGACAGCAAGCTGAAAATGACTCCCTCCATCTCATGGG255830.12418199606188277No Hit
GTCCTGACAGACAGACAATCCTATTCCCTACCAAAATGAAGATGCTGCTG254080.12333253160068472No Hit
GTGGTCCTGACAGACAGACAATCCTATTCCCTACCAAAATGAAGATGCTG242930.11792022946219434No Hit
CAACAACCCTGAACATCAGGAGTCAGCTATCACAGAGGCTCTGCAGCCTG239800.11640090159730869No Hit
ACAAGAAAGACGTGGTCCTGACAGACAGACAATCCTATTCCCTACCAAAA228600.11096432904564124No Hit
CTCATGCATATCACATAGTTAATCCAAGTCCATGACCATTAACTGGAGCC219620.10660536283903645No Hit
CACGGACAGGATTGACAGATTGATAGCTCTTTCTCGATTCCGTGGGTGGT212360.10308129884572341No Hit
CTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAGT207510.100727068767546No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)