FastQCFastQC Report
Mon 20 Jun 2022
SRR13762416_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR13762416_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20601215
Sequences flagged as poor quality0
Sequence length151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCGAATGTGTGATATGGTGGAGGGCAGCCATGAAGTCATTCTAAATTTG1407510.6832169850176312No Hit
CTTTTCTACATTAAAGTTCCTTCCCGTAGAACTAGCTTCTTCTGCATGGA858410.41667930750686305No Hit
CTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTCAC648820.3149425895511503No Hit
CAGGATAATAGTATGCCATTCCCCATTAATCTTTTCTACATTAAAGTTCC477270.23167080194056514No Hit
ATCGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCAC426490.20702177031791574No Hit
CTTTTCGTTAATGAGATGAGCCATAAGAAAGTTATCATAGTCTGTCTTAG420570.20414815339774864No Hit
CAGCCTTTTCTGTTTTGTCAGCAACCATAGATAATTCGGAGCACTCTTCA381490.1851783984585375No Hit
CGGGCCTGGAGGCAGCGATTGGCATTGGATAGGTCAATGATATTTTCTCT356570.1730820245310774No Hit
GTCGGCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAGGAGAGG336990.16357773073093018No Hit
CAGAATATTCACCAGCCTTTTCTGTTTTGTCAGCAACCATAGATAATTCG321210.15591798833224155No Hit
AAGAAAGTTATCATAGTCTGTCTTAGGTATAGTAAATGTATTGAATCCAT289930.14073441784865603No Hit
CGCGTAACTAGTTAGCATGCCAGAGTCTCGTTCGTTATCGGAATTAACCA278190.13503572483467602No Hit
CTTTTCTGTTTTGTCAGCAACCATAGATAATTCGGAGCACTCTTCATCTC255310.12392958376484106No Hit
CTTCTATCTTTTCTCTTTTGTCAGAGGCCAGGATAATAGTATGCCATTCC252440.12253646204847626No Hit
CTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCAACTAAGAAC238640.1158378280116003No Hit
CCAGCCTTTTCTGTTTTGTCAGCAACCATAGATAATTCGGAGCACTCTTC232300.11276033962074566No Hit
CTCGGGCCTGGAGGCAGCGATTGGCATTGGATAGGTCAATGATATTTTCT210490.10217358539290036No Hit
GTCTGTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAAT208920.10141149441913984No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)