FastQCFastQC Report
Mon 20 Jun 2022
SRR13762411_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR13762411_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences24312041
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTCACCCGGCCCGGACACGGACAGGATTGACAGATTGATAGCTCTTTCT1611630.6628937488218287No Hit
CACGATCACAAGAAAGACGTGGTCCTGACAGACAGACAATCCTATTCCCT1154670.4749375011336975No Hit
CCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAG954350.3925421152424019No Hit
CTAGCCTCTGGCAAAATGAAGTGGGTAACCTTTCTCCTCCTCCTCTTCGT859580.3535614307330265No Hit
GAAAGACGTGGTCCTGACAGACAGACAATCCTATTCCCTACCAAAATGAA833460.3428177831717214No Hit
CCCCACTAGCCTCTGGCAAAATGAAGTGGGTAACCTTTCTCCTCCTCCTC827460.3403498702556482No Hit
CGATCACAAGAAAGACGTGGTCCTGACAGACAGACAATCCTATTCCCTAC790740.32524624320928053No Hit
CTCACCCGGCCCGGACACGGACAGGATTGACAGATTGATAGCTCTTTCTC713610.29352122267316016No Hit
CAAGAAAGACGTGGTCCTGACAGACAGACAATCCTATTCCCTACCAAAAT693300.2851673374522526No Hit
CTCTGGCAAAATGAAGTGGGTAACCTTTCTCCTCCTCCTCTTCGTCTCCG595280.24484986678000423No Hit
CGGAGAGCTCCGGGGAGGTCACCCACACCCTTCAGGATGAAAGCTGTGGT576080.2369525454485701No Hit
AAGAAAGACGTGGTCCTGACAGACAGACAATCCTATTCCCTACCAAAATG556400.22885779108385018No Hit
CACAAGAAAGACGTGGTCCTGACAGACAGACAATCCTATTCCCTACCAAA496120.20406349265370194No Hit
CACCCAGCTCTGGGACAGCAAGCTGAAAATGACTCCCTCCATCTCATGGG460900.18957684383635254No Hit
CACTAGCCTCTGGCAAAATGAAGTGGGTAACCTTTCTCCTCCTCCTCTTC350250.14406441647577017No Hit
AGAAAGACGTGGTCCTGACAGACAGACAATCCTATTCCCTACCAAAATGA338100.13906689282072204No Hit
CCACCCAGCTCTGGGACAGCAAGCTGAAAATGACTCCCTCCATCTCATGG323150.13291767647150646No Hit
AAGACGTGGTCCTGACAGACAGACAATCCTATTCCCTACCAAAATGAAGA322990.13285186546041117No Hit
AAAGACGTGGTCCTGACAGACAGACAATCCTATTCCCTACCAAAATGAAG314630.1294132401306826No Hit
CAACAACCCTGAACATCAGGAGTCAGCTATCACAGAGGCTCTGCAGCCTG310490.1277103802185921No Hit
CACCCAGCTCTGAGACAGCAAGCTGAAAATGACTCCCTCCATCTCATGGT308770.1270029118493178No Hit
CCACTAGCCTCTGGCAAAATGAAGTGGGTAACCTTTCTCCTCCTCCTCTT290800.11961151266567871No Hit
CCCAGCTCTGGGACAGCAAGCTGAAAATGACTCCCTCCATCTCATGGGGT278340.11448648017663346No Hit
CCACGATCACAAGAAAGACGTGGTCCTGACAGACAGACAATCCTATTCCC269400.11080928993168447No Hit
CTCAACCAATCACAAAGATATCGGAACCCTCTATCTACTATTCGGAGCCT257270.10581999265302325No Hit
CTCATGCATATCACATAGTTAATCCAAGTCCATGACCATTAACTGGAGCC256170.10536754195174317No Hit
CTTGTTTCGGAAGGAGCTGACTGGCCAATCACAATTGCGAAGATGAAGGC244520.1005756777063678No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)