FastQCFastQC Report
Mon 20 Jun 2022
SRR13762411_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR13762411_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences24312041
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCGAATGTGTGATATGGTGGAGGGCAGCCATGAAGTCATTCTAAATTTG700440.28810415382237964No Hit
CTTTTCTACATTAAAGTTCCTTCCCGTAGAACTAGCTTCTTCTGCATGGA462010.19003340772582605No Hit
CTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTCAC400640.1647907717825912No Hit
GTCGGCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAGGAGAGG384310.15807393546267876No Hit
CAGGATAATAGTATGCCATTCCCCATTAATCTTTTCTACATTAAAGTTCC351780.14469373426936882No Hit
CAGCCTTTTCTGTTTTGTCAGCAACCATAGATAATTCGGAGCACTCTTCA324040.13328375022072397No Hit
ATCGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCAC319980.13161379581418114No Hit
GGGCGATCTCACTCTTGTGTGCTTCTCGGCGAAACACACCCCTGGAAAAA312060.12835615076496457No Hit
CGGGCCTGGAGGCAGCGATTGGCATTGGATAGGTCAATGATATTTTCTCT281460.1157697948929915No Hit
CCGTCGGCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAGGAGA273410.11245867839726002No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)