FastQCFastQC Report
Mon 20 Jun 2022
SRR13762410_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR13762410_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23350007
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTCACCCGGCCCGGACACGGACAGGATTGACAGATTGATAGCTCTTTCT2930051.2548390242452605No Hit
CTCACCCGGCCCGGACACGGACAGGATTGACAGATTGATAGCTCTTTCTC1573280.673781382592305No Hit
CCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAG1305720.5591946931750384No Hit
CTAGCCTCTGGCAAAATGAAGTGGGTAACCTTTCTCCTCCTCCTCTTCGT862680.3694559920260409No Hit
CTCTGGCAAAATGAAGTGGGTAACCTTTCTCCTCCTCCTCTTCGTCTCCG576640.24695495808630807No Hit
CCCCACTAGCCTCTGGCAAAATGAAGTGGGTAACCTTTCTCCTCCTCCTC507730.21744318963159195No Hit
CACCCGGCCCGGACACGGACAGGATTGACAGATTGATAGCTCTTTCTCGA431350.18473227866698283No Hit
CTCAACCAATCACAAAGATATCGGAACCCTCTATCTACTATTCGGAGCCT363370.15561879703076748No Hit
CTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAGT358820.15367018947788752No Hit
CACGATCACAAGAAAGACGTGGTCCTGACAGACAGACAATCCTATTCCCT338370.14491216212483363No Hit
CACGGACAGGATTGACAGATTGATAGCTCTTTCTCGATTCCGTGGGTGGT326760.13994000087451794No Hit
GAAAGACGTGGTCCTGACAGACAGACAATCCTATTCCCTACCAAAATGAA290110.12424407410241889No Hit
CTCATGCATATCACATAGTTAATCCAAGTCCATGACCATTAACTGGAGCC282850.12113486732573571No Hit
CTACAAGACGCCACATCCCCTATTATAGAAGAGCTAATAAATTTCCATGA275740.11808990035848811No Hit
CAAGACGCCACATCCCCTATTATAGAAGAGCTAATAAATTTCCATGATCA267930.11474514761387437No Hit
CACTAGCCTCTGGCAAAATGAAGTGGGTAACCTTTCTCCTCCTCCTCTTC253780.10868519225711581No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)