FastQCFastQC Report
Mon 20 Jun 2022
SRR13762405_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR13762405_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20053672
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTCACCCGGCCCGGACACGGACAGGATTGACAGATTGATAGCTCTTTCT2076311.0353764637219558No Hit
CTCACCCGGCCCGGACACGGACAGGATTGACAGATTGATAGCTCTTTCTC1066280.5317130947389584No Hit
CCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAG843290.42051650191545964No Hit
CTAGCCTCTGGCAAAATGAAGTGGGTAACCTTTCTCCTCCTCCTCTTCGT330250.16468305654944393No Hit
CACCCGGCCCGGACACGGACAGGATTGACAGATTGATAGCTCTTTCTCGA305350.15226637794813838No Hit
CACGGACAGGATTGACAGATTGATAGCTCTTTCTCGATTCCGTGGGTGGT243110.1212296680627867No Hit
CTCAACCAATCACAAAGATATCGGAACCCTCTATCTACTATTCGGAGCCT235330.11735007932711776No Hit
CAAGACGCCACATCCCCTATTATAGAAGAGCTAATAAATTTCCATGATCA218490.10895261476302197No Hit
CTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAGT216670.10804505030300685No Hit
CTACAAGACGCCACATCCCCTATTATAGAAGAGCTAATAAATTTCCATGA215910.10766606734168185No Hit
CTCTGGCAAAATGAAGTGGGTAACCTTTCTCCTCCTCCTCTTCGTCTCCG212750.10609029608143584No Hit
CCCCACTAGCCTCTGGCAAAATGAAGTGGGTAACCTTTCTCCTCCTCCTC205950.10269939590115965No Hit
CGTGGATCTGTGTCTTGCTTCAACAGTGTTTGAACGGAACAGACCCGGGG202060.10075960153332518No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)