FastQCFastQC Report
Wed 27 Sep 2023
SRR16082804_pass_2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR16082804_pass_2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19817731
Sequences flagged as poor quality0
Sequence length150
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGTTTAGTGAGGCCCTCGGATCGGCCCCGCCGGGGTCGGCCCACGGC706630.3565645330436668No Hit
GGCACTAATCCTAGCCCTAGCCCTACACAAATATAATTATACTATTATAT585000.29519020113856625No Hit
GGGACTAATCCTAGCCCTAGCCCTACACAAATATAATTATACTATTATAT537160.2710502024676791No Hit
GGGGGATGGTTTAGTGAGGCCCTCGGATCGGCCCCGCCGGGGTCGGCCCA424420.21416175242261587No Hit
CGGACTAATCCTAGCCCTAGCCCTACACAAATATAATTATACTATTATAT343940.17355165432409997No Hit
GGGGTTTAGTGAGGCCCTCGGATCGGCCCCGCCGGGGTCGGCCCACGGCC329560.16629552596106992No Hit
GGGGAGGCCCTCGGATCGGCCCCGCCGGGGTCGGCCCACGGCCCTGGCGG325890.16444364897273053No Hit
GCCACTAATCCTAGCCCTAGCCCTACACAAATATAATTATACTATTATAT306050.15443241206574052No Hit
CGCACTAATCCTAGCCCTAGCCCTACACAAATATAATTATACTATTATAT284810.14371473707055565No Hit
GGGGGCCCTCGGATCGGCCCCGCCGGGGTCGGCCCACGGCCCTGGCGGAG251410.126861142680764No Hit
GGGAGGAGGGCCGCTGCGGTGAGCCTTGAAGCCTAGGGCGCGGGCCCGGG228710.1154067536793188No Hit
GGGGGATCGGCCCCGCCGGGGTCGGCCCACGGCCCTGGCGGAGCGCTGAG221660.11184933330662325No Hit
CGGGGTTTAGTGAGGCCCTCGGATCGGCCCCGCCGGGGTCGGCCCACGGC218160.1100832380861361No Hit
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG216720.10935661605256425No Hit
GGGGATGGTTTAGTGAGGCCCTCGGATCGGCCCCGCCGGGGTCGGCCCAC211750.10684876083947249No Hit
GGGGGGCCCCGCGGACGCTACGCCGCGACGAGTAGGAGGGCCGCTGCGGT202810.10233764904771388No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)