FastQCFastQC Report
Wed 27 Sep 2023
SRR16082803_pass_2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR16082803_pass_2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9993591
Sequences flagged as poor quality0
Sequence length150
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGTTTAGTGAGGCCCTCGGATCGGCCCCGCCGGGGTCGGCCCACGGC422140.42241072303239147No Hit
GGCACTAATCCTAGCCCTAGCCCTACACAAATATAATTATACTATTATAT314730.3149318398161382No Hit
GGGACTAATCCTAGCCCTAGCCCTACACAAATATAATTATACTATTATAT302080.30227372723178286No Hit
GGGGGATGGTTTAGTGAGGCCCTCGGATCGGCCCCGCCGGGGTCGGCCCA215720.21585834361242123No Hit
GGGGAGGCCCTCGGATCGGCCCCGCCGGGGTCGGCCCACGGCCCTGGCGG199450.19957790948218712No Hit
GGGGTTTAGTGAGGCCCTCGGATCGGCCCCGCCGGGGTCGGCCCACGGCC196180.1963058123951641No Hit
CGGACTAATCCTAGCCCTAGCCCTACACAAATATAATTATACTATTATAT194040.19416443998958932No Hit
GGGGGCCCTCGGATCGGCCCCGCCGGGGTCGGCCCACGGCCCTGGCGGAG170420.17052929222338598No Hit
GCCACTAATCCTAGCCCTAGCCCTACACAAATATAATTATACTATTATAT164020.1641251878328821No Hit
CGCACTAATCCTAGCCCTAGCCCTACACAAATATAATTATACTATTATAT159170.15927207747445338No Hit
GGGGGATCGGCCCCGCCGGGGTCGGCCCACGGCCCTGGCGGAGCGCTGAG137670.13775828928760442No Hit
CGGGGTTTAGTGAGGCCCTCGGATCGGCCCCGCCGGGGTCGGCCCACGGC132880.13296521740783668No Hit
GGGGCCGGGCGCGGTGGCGCACGCCTGTAGTCCCAGCTACTCGGGAGGCT111100.11117124965390318No Hit
GGGGATGGTTTAGTGAGGCCCTCGGATCGGCCCCGCCGGGGTCGGCCCAC110690.11076098671638653No Hit
GGGGTGAGGCCCTCGGATCGGCCCCGCCGGGGTCGGCCCACGGCCCTGGC105690.10575778016130538No Hit
GGGGGCCCCGCCGGGGTCGGCCCACGGCCCTGGCGGAGCGCTGAGAAGAC100720.10078459284555472No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)