FastQCFastQC Report
Wed 27 Sep 2023
SRR16082802_pass_2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR16082802_pass_2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23352405
Sequences flagged as poor quality0
Sequence length150
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGTTTAGTGAGGCCCTCGGATCGGCCCCGCCGGGGTCGGCCCACGGC916590.392503470199322No Hit
GGCACTAATCCTAGCCCTAGCCCTACACAAATATAATTATACTATTATAT626040.2680837369855482No Hit
GGGACTAATCCTAGCCCTAGCCCTACACAAATATAATTATACTATTATAT589920.2526163793408002No Hit
GGGGGATGGTTTAGTGAGGCCCTCGGATCGGCCCCGCCGGGGTCGGCCCA552720.23668654256381727No Hit
GGGGTTTAGTGAGGCCCTCGGATCGGCCCCGCCGGGGTCGGCCCACGGCC406140.17391784700547971No Hit
CGGACTAATCCTAGCCCTAGCCCTACACAAATATAATTATACTATTATAT367430.1573413958862053No Hit
GGGGAGGCCCTCGGATCGGCCCCGCCGGGGTCGGCCCACGGCCCTGGCGG354910.15198006372362932No Hit
GCCACTAATCCTAGCCCTAGCCCTACACAAATATAATTATACTATTATAT320260.13714219156442345No Hit
CGCACTAATCCTAGCCCTAGCCCTACACAAATATAATTATACTATTATAT302510.12954126138185768No Hit
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG297950.12758857171242105No Hit
GGGGGCCCTCGGATCGGCCCCGCCGGGGTCGGCCCACGGCCCTGGCGGAG286380.12263404989764437No Hit
CGGGGTTTAGTGAGGCCCTCGGATCGGCCCCGCCGGGGTCGGCCCACGGC273340.11705004259732563No Hit
GGGGATGGTTTAGTGAGGCCCTCGGATCGGCCCCGCCGGGGTCGGCCCAC261990.11218972949467089No Hit
GGGGGATCGGCCCCGCCGGGGTCGGCCCACGGCCCTGGCGGAGCGCTGAG236160.10112877024871741No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)