FastQCFastQC Report
Wed 27 Sep 2023
SRR16082801_pass_2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR16082801_pass_2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18089361
Sequences flagged as poor quality0
Sequence length150
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGTTTAGTGAGGCCCTCGGATCGGCCCCGCCGGGGTCGGCCCACGGC804450.4447089092865138No Hit
GGGGGATGGTTTAGTGAGGCCCTCGGATCGGCCCCGCCGGGGTCGGCCCA439080.24272830864506492No Hit
GGGGAGGCCCTCGGATCGGCCCCGCCGGGGTCGGCCCACGGCCCTGGCGG437090.24162821450685848No Hit
GGGGTTTAGTGAGGCCCTCGGATCGGCCCCGCCGGGGTCGGCCCACGGCC372760.2060658748531803No Hit
GGGGGCCCTCGGATCGGCCCCGCCGGGGTCGGCCCACGGCCCTGGCGGAG345670.19109022148432994No Hit
GGCACTAATCCTAGCCCTAGCCCTACACAAATATAATTATACTATTATAT326920.1807250128957015No Hit
GGGACTAATCCTAGCCCTAGCCCTACACAAATATAATTATACTATTATAT314380.17379276139162683No Hit
GGGGGATCGGCCCCGCCGGGGTCGGCCCACGGCCCTGGCGGAGCGCTGAG282250.15603093995415315No Hit
CGGGGTTTAGTGAGGCCCTCGGATCGGCCCCGCCGGGGTCGGCCCACGGC243320.13451000286853693No Hit
GGGGTGAGGCCCTCGGATCGGCCCCGCCGGGGTCGGCCCACGGCCCTGGC228800.12648318533750308No Hit
GGGGATGGTTTAGTGAGGCCCTCGGATCGGCCCCGCCGGGGTCGGCCCAC219430.12130334509881249No Hit
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG204510.1130554031178879No Hit
CGGACTAATCCTAGCCCTAGCCCTACACAAATATAATTATACTATTATAT200510.11084415861898052No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG196650.10871030767753487No Hit
GGGTAGTGAGGCCCTCGGATCGGCCCCGCCGGGGTCGGCCCACGGCCCTG196630.10869925145504034No Hit
GGGGGCCCCGCCGGGGTCGGCCCACGGCCCTGGCGGAGCGCTGAGAAGAC191920.10609551105757688No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)