FastQCFastQC Report
Tue 19 Jul 2022
GSM4964634_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameGSM4964634_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences39575989
Sequences flagged as poor quality0
Sequence length35-51
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCGCCAGTCGGCATCGTTTATGGTCGGAACTACGACGGTATCTGATCGTC1492260.3770619604730535No Hit
CTGGGGTCTGATGAGCGTCGGCATCGGGCGCCTTAACCCGGCGTTCGGTTC1132220.2860876073115949No Hit
CCCGTGTTGAGTCAAATTAAGCCGCAGGCTCCACTCCTGGTGGTGCCCTTC879540.22224081374188778No Hit
GTGGGTCTTCCGTACGCCACATTTCCCACGCCGCGACGCGCGGCGGGGATT797080.20140494783339463No Hit
CTGCGTACGTCGGGAGCGAGAGCGCCAGCTATCCTGAGGGAAACTTCGG753390.1903654258646575No Hit
CTCCCTTTCGATCGGCCGAGGGCAACGGAGGCCATCGCCCGTCCCTTCGG612790.15483883422344796No Hit
CTTGATTAATGAAAACATTCTTGGCAAATGCTTTCGCTCTGGTCCGTCTTG605080.15289068328778846No Hit
GTTCGGTTCATCCCGCAGCGCCAGTTCTGCTTACCAAAAGTGGCCCACT576180.14558827575983005No Hit
CTCCGACTTTCGTTCTTGATTAATGAAAACATTCTTGGCAAATGCTTTCGC513460.129740282674932No Hit
CTCTTAATCATGGCCTCAGTTCCGAAAACCAACAAAATAGAACCGCGGTCC510210.12891907767611316No Hit
CATCGCCAGTCGGCATCGTTTATGGTCGGAACTACGACGGTATCTGATCGT492130.12435065109806859No Hit
GTTCTTGATTAATGAAAACATTCTTGGCAAATGCTTTCGCTCTGGTCCGTC476650.12043918851907909No Hit
CTCCTCATTTCCTTTTTCAAACTGTTTAAATAAGCCTTCATGTTATCTCTT470790.11895849273659338No Hit
GCCCTCTTGAACTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTAC459760.1161714493098328No Hit
GTGCGTACTTCATTGCTCAATTCAATTAAGCTCTCTATTCTTAATTTACT443040.11194666543898625No Hit
CTCCGCCACTCCGGATTCGGGGATCTGAACCCGACTCCCTTTCGATCGGCC421070.1063953196469708No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)