FastQCFastQC Report
Wed 13 Oct 2021
SRR11130950_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR11130950_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7855482
Sequences flagged as poor quality0
Sequence length150
%GC64

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGGTATCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGGCCGGA2355102.9980337298207798No Hit
CTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGGCCGGAGGGCTGT971971.237314273013419No Hit
GGGTATCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGGCCGGAG934491.1896023694026667No Hit
GCGGCGACGGGTATCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGC891361.1346980363521932No Hit
GGGGAAGAGAGGTGGCGACGACGCGGGGGACGACGGGGCCCCGCGGGGAA760210.9677445636053905No Hit
GTGGCGACGACGCGGGGGACGACGGGGCCCCGCGGGGAAGAGGGGAGGGC751960.9572423436270365No Hit
GGGGGAAGAGAGGTGGCGACGACGCGGGGGACGACGGGGCCCCGCGGGGA739890.9418772775496144No Hit
GACGGGTATCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGGCCG716040.9115163143394639No Hit
GCGACGGGTATCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGGC638190.8124135476346328No Hit
GGGGGGAAGAGAGGTGGCGACGACGCGGGGGACGACGGGGCCCCGCGGGG598090.7613663935580274No Hit
CCGGTGTTGGGTTAACAGAGAAGTTATAGGTGGATTATTTATAGTGTGAT587260.7475798429682609No Hit
CCGGGATTCGGCGAAAGCTGCGGCCGGAGGGCTGTAACACTCGGGGTGAG541350.6891365800341723No Hit
CCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCA518960.6606341915111001No Hit
CCCCGAGCCACCTTCCCCACCGGGCCTTCCCGGCCGTCCCGGAGCCGGTC513600.6538109310160727No Hit
GGCGACGACGCGGGGGACGACGGGGCCCCGCGGGGAAGAGGGGAGGGCGG504530.6422648540216883No Hit
GTGGCTATTCACAGGCGCGATCCCACTACTGATCAGCACGGGAGTTTTGA465220.5922233670702829No Hit
GGCGACGGGTATCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGG444710.5661142117059145No Hit
CGACGGGTATCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGGCC407150.5183004683862811No Hit
CGGCGACGGGTATCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCG395130.5029990521269097No Hit
CTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGT372520.47421660440441465No Hit
GTTGGGTTAACAGAGAAGTTATAGGTGGATTATTTATAGTGTGATTATTG362790.46183034981176196No Hit
CCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATAT356580.4539250424098738No Hit
GGGAGAGGGAGAGCGCGGCGACGGGTATCTGGCTTCCTCGGCCCCGGGAT339070.43163487612854307No Hit
ATCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGGCCGGAGGGCT336270.42807048631770783No Hit
CGCGGCGACGGGTATCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTG335240.4267593000658649No Hit
GTGGGAGAGCGGTCGCGCCGTGGGAGGGGCGGCCCGGCCCCCACCCCCAC333870.42501529505127755No Hit
TCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGGCCGGAGGGCTG332770.4236149990541637No Hit
GCTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGG324690.41332918845718186No Hit
GGTGGAAGTGCGCCCGGCGGCGGCCGGTCGCCGGCCGGGGGGCGGTCCCC318470.40541115109168346No Hit
GCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGGCCGGAGGGCTGTAAC312060.3972512444175927No Hit
GGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGCGGCCCGGCCCCCACCCCC311380.39638560689210417No Hit
CCCCACTACCACAAATTATGCAGTCGAGTTTCCCGCATTTGGGGAAATCG309140.39353409504343584No Hit
GCCCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGAT306830.3905934734494968No Hit
CCCCGTTTCCCAAGACGAACGGCTCTCCGCACCGGACCCCGGTCCCGACG299960.3818479884493402No Hit
GGGGGGGAAGAGAGGTGGCGACGACGCGGGGGACGACGGGGCCCCGCGGG270840.34477833441665323No Hit
CTCCTACTCGTCGCGGCGTAGCGTCCGCGGGGCCCGACGCCGCGGGGGCG263960.33602011945288657No Hit
GGGAAGAGAGGTGGCGACGACGCGGGGGACGACGGGGCCCCGCGGGGAAG251630.32032407432160115No Hit
AGCGCGGCGACGGGTATCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGC240200.3057737259152271No Hit
CCCGTTTCCCAAGACGAACGGCTCTCCGCACCGGACCCCGGTCCCGACGC238220.30325319312042215No Hit
GGTGGGAGAGCGGTCGCGCCGTGGGAGGGGCGGCCCGGCCCCCACCCCCA228610.2910196980910911No Hit
CCCCGCCCCACCGGGGGCCCGCTGGTTCCTCCCGCTCCGGAACCCCCGCG227190.2892120432584531No Hit
CCCGGGATTCGGCGAAAGCTGCGGCCGGAGGGCTGTAACACTCGGGGTGA226290.2880663465335418No Hit
GGGGGGGTGGAGCGAGGCCCCGCGGGGAGGGGACCCGCGCCGGCACCCGC226270.28804088660632154No Hit
GGGAGAGCGGTCGCGCCGTGGGAGGGGCGGCCCGGCCCCCACCCCCACGC225650.2872516288624937No Hit
GGGGAGAGGGAGAGCGCGGCGACGGGTATCTGGCTTCCTCGGCCCCGGGA222980.2838527285785901No Hit
GGCGACGGAGGGGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGCGGCCCG218500.2781497048812536No Hit
ACGGGTATCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGGCCGG216560.27568009194088916No Hit
GTGGAAGTGCGCCCGGCGGCGGCCGGTCGCCGGCCGGGGGGCGGTCCCCC214490.2730449894735931No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGCGGCCCGGCCCCCACCCC211210.2688695614094717No Hit
GGGGGGTGGAGCGAGGCCCCGCGGGGAGGGGACCCGCGCCGGCACCCGCC208450.265356091453077No Hit
CCGAGTTGTTATACGCGTATGCCTGGAGAATTGGAATTCTTGTTACTCAT188700.24021441332307808No Hit
GTCCCCCACTACCACAAATTATGCAGTCGAGTTTCCCGCATTTGGGGAAA188670.24017622343224768No Hit
CCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATT187880.23917055630704775No Hit
GTCGGCTGCTAGGCGCCGGCCGAGGCGAGGCGCCGCGCGGAAAACCGCGG178070.22668246200551412No Hit
CTATAGTCTGATTAACTAACAATGGTTATCCGAGTTGTTATACGCGTATG174710.22240519423251176No Hit
GGTATCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGGCCGGAGG174030.22153955670702322No Hit
CCCCCACTACCACAAATTATGCAGTCGAGTTTCCCGCATTTGGGGAAATC173170.22044477983655233No Hit
CGGGGGGAGAGGGAGAGCGCGGCGACGGGTATCTGGCTTCCTCGGCCCCG171900.21882807445806635No Hit
CCTCCTACTCGTCGCGGCGTAGCGTCCGCGGGGCCCGACGCCGCGGGGGC171770.21866258493113472No Hit
GGGGGGAGAGGGAGAGCGCGGCGACGGGTATCTGGCTTCCTCGGCCCCGG169250.21545463410138294No Hit
GGCTCTCCGCACCGGACCCCGGTCCCGACGCCCGGCGGGGGGAGACCCCG167080.21269223199798562No Hit
GGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGGCCGGAGGGCTGTAA162540.20691282851898837No Hit
CGGGATTCGGCGAAAGCTGCGGCCGGAGGGCTGTAACACTCGGGGTGAGG160500.2043159159425227No Hit
GTGATTATTGCCTATAGTCTGATTAACTAACAATGGTTATCCGAGTTGTT159370.20287743005457845No Hit
GCCACCTTCCCCACCGGGCCTTCCCGGCCGTCCCGGAGCCGGTCGCGGCG158270.2014771340574646No Hit
GCTCTCCGCACCGGACCCCGGTCCCGACGCCCGGCGGGGGGAGACCCCGC157820.2009042856950089No Hit
GTATCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGGCCGGAGGG156660.1994276099162343No Hit
CCCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATC156220.19886749151738875No Hit
CCCCACCGGGCCTTCCCGGCCGTCCCGGAGCCGGTCGCGGCGCACCGCCA151920.19339360716503456No Hit
TGGCTATTCACAGGCGCGATCCCACTACTGATCAGCACGGGAGTTTTGAC150490.19157322236878654No Hit
CAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCAG142380.18124922188097434No Hit
GGGGTCTCGCTATGTTGCCCAGGCTGGAGTGCAGTGGCTATTCACAGGCG140820.17926334755779466No Hit
GTCCGCGGGGCCCGACGCCGCGGGGGCGAAACCCGGCGCGCGGAGGGGAG139430.17749388261598717No Hit
CCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTG138380.17615723643692394No Hit
CCTATAGTCTGATTAACTAACAATGGTTATCCGAGTTGTTATACGCGTAT138080.17577533752862012No Hit
CCCCGGGATTCGGCGAAAGCTGCGGCCGGAGGGCTGTAACACTCGGGGTG137030.1744386913495569No Hit
GCCTATAGTCTGATTAACTAACAATGGTTATCCGAGTTGTTATACGCGTA131100.16688982292875218No Hit
GCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCAGCACGGGAGTTT129330.16463661936975987No Hit
GGGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGCGGCCCGGCCCCCACCC124430.15839893720079812No Hit
GGGGGAGAGGGAGAGCGCGGCGACGGGTATCTGGCTTCCTCGGCCCCGGG123820.15762240942058045No Hit
TTCCGGTGTTGGGTTAACAGAGAAGTTATAGGTGGATTATTTATAGTGTG123800.15759694949336017No Hit
GGAGAGGGAGAGCGCGGCGACGGGTATCTGGCTTCCTCGGCCCCGGGATT123090.15669312207704122No Hit
GTCCCGGAGCCGGTCGCGGCGCACCGCCACGGTGGAAGTGCGCCCGGCGG122270.1556492650610109No Hit
CGGCTCTCCGCACCGGACCCCGGTCCCGACGCCCGGCGGGGGGAGACCCC121550.15473270768108183No Hit
GGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCAGCA119630.15228855466793764No Hit
TATCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGGCCGGAGGGC119390.1519830355412946No Hit
GGAGGGGCGGCCCGGCCCCCACCCCCACGCCCGCCCGGGAGGCGGACGGG118480.15082460885277313No Hit
GCGACGGAGGGGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGCGGCCCGG114770.1461017923534164No Hit
GCGACGACGCGGGGGACGACGGGGCCCCGCGGGGAAGAGGGGAGGGCGGG110820.1410734567274166No Hit
GGCGGACGGGGGGAGAGGGAGAGCGCGGCGACGGGTATCTGGCTTCCTCG109500.13939310153087994No Hit
CCTCGGCCCCGGGATTCGGCGAAAGCTGCGGCCGGAGGGCTGTAACACTC109000.13875660335037368No Hit
GCGCGGCGACGGGTATCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCT108600.13824740480596864No Hit
GAGAGGGAGAGCGCGGCGACGGGTATCTGGCTTCCTCGGCCCCGGGATTC106210.1352049435031485No Hit
CGACGGAGGGGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGCGGCCCGGC105190.13390648721491566No Hit
GCCCGGGGGGCGGACCCGGCGGGGGAACACCGACGCGGAGGTTCCCCCCA103750.13207337245505751No Hit
GGCTATTCACAGGCGCGATCCCACTACTGATCAGCACGGGAGTTTTGACC101280.12892907144335639No Hit
CCCTCCTACTCGTCGCGGCGTAGCGTCCGCGGGGCCCGACGCCGCGGGGG101070.12866174220754373No Hit
GGGGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGCGGCCCGGCCCCCACC101010.12858536242588298No Hit
GTCCGGGCCCCCCGCCCCACCGGGGGCCCGCTGGTTCCTCCCGCTCCGGA99110.12616666933995901No Hit
GGTTAACAGAGAAGTTATAGGTGGATTATTTATAGTGTGATTATTGCCTA97200.12373524629042496No Hit
GTCGCGGCGTAGCGTCCGCGGGGCCCGACGCCGCGGGGGCGAAACCCGGC96330.12262773945634399No Hit
CCGGGCCTTCCCGGCCGTCCCGGAGCCGGTCGCGGCGCACCGCCACGGTG94690.12054002542428333No Hit
CACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCAT93190.11863053088276442No Hit
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGGCTACATCTCGTATGC90990.11582993888853668TruSeq Adapter, Index 11 (100% over 50bp)
GGAAGAGAGGTGGCGACGACGCGGGGGACGACGGGGCCCCGCGGGGAAGA89870.11440418296420259No Hit
GGGAGGGGCGGCCCGGCCCCCACCCCCACGCCCGCCCGGGAGGCGGACGG89850.11437872303698234No Hit
CCGGCCGCACCCCGTTTCCCAAGACGAACGGCTCTCCGCACCGGACCCCG89600.11406047394672918No Hit
CCCGGAGCCGGTCGCGGCGCACCGCCACGGTGGAAGTGCGCCCGGCGGCG89200.11355127540232414No Hit
TGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGGCCGGAGGGCTGTA89170.11351308551149376No Hit
TCCGGTGTTGGGTTAACAGAGAAGTTATAGGTGGATTATTTATAGTGTGA88500.1126601779496153No Hit
GTGGATTATTTATAGTGTGATTATTGCCTATAGTCTGATTAACTAACAAT88130.11218916929604066No Hit
GACGGAGGGGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGCGGCCCGGCC87120.11090344297141792No Hit
GGGAGAGCGCGGCGACGGGTATCTGGCTTCCTCGGCCCCGGGATTCGGCG85350.1086502394124256No Hit
CCCAAGACGAACGGCTCTCCGCACCGGACCCCGGTCCCGACGCCCGGCGG84280.10728813330614212No Hit
CCCACTACCACAAATTATGCAGTCGAGTTTCCCGCATTTGGGGAAATCGC82210.10465303083884606No Hit
GTTGCCCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACT81940.10430932182137263No Hit
CCCGAGCCACCTTCCCCACCGGGCCTTCCCGGCCGTCCCGGAGCCGGTCG80970.10307451535119042No Hit
CTCGGCCCCGGGATTCGGCGAAAGCTGCGGCCGGAGGGCTGTAACACTCG80870.10294721571508915No Hit
TCCTACTCGTCGCGGCGTAGCGTCCGCGGGGCCCGACGCCGCGGGGGCGA79800.10158510960880567No Hit
CTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGGCCGGAGGGCTGTAACA79490.10119048073689177No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)