FastQCFastQC Report
Wed 13 Oct 2021
SRR11130948_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR11130948_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12247935
Sequences flagged as poor quality0
Sequence length150
%GC61

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGGTATCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGGCCGGA2399841.959383357276145No Hit
CCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCA1159330.9465513982561142No Hit
CTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGGCCGGAGGGCTGT1072500.875657814970442No Hit
GGGTATCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGGCCGGAG969690.7917171343577509No Hit
GCGGCGACGGGTATCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGC912530.7450480427925197No Hit
GGGGAAGAGAGGTGGCGACGACGCGGGGGACGACGGGGCCCCGCGGGGAA864480.7058169397535177No Hit
GGGGGAAGAGAGGTGGCGACGACGCGGGGGACGACGGGGCCCCGCGGGGA848790.6930066170338102No Hit
GACGGGTATCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGGCCG809570.6609848925553573No Hit
GTGGCGACGACGCGGGGGACGACGGGGCCCCGCGGGGAAGAGGGGAGGGC771840.6301796996799869No Hit
GTGGCTATTCACAGGCGCGATCCCACTACTGATCAGCACGGGAGTTTTGA755640.6169529802370767No Hit
GCCCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGAT700150.5716473838242937No Hit
GCGACGGGTATCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGGC698480.5702838886718454No Hit
GGGGGGAAGAGAGGTGGCGACGACGCGGGGGACGACGGGGCCCCGCGGGG696610.5687571006867689No Hit
CCGGTGTTGGGTTAACAGAGAAGTTATAGGTGGATTATTTATAGTGTGAT646190.5275909775811187No Hit
CCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATAT640910.5232800467997258No Hit
CCGGGATTCGGCGAAAGCTGCGGCCGGAGGGCTGTAACACTCGGGGTGAG595210.48596763454410885No Hit
CCCCGCCCCACCGGGGGCCCGCTGGTTCCTCCCGCTCCGGAACCCCCGCG555410.45347236085103326No Hit
GGCGACGGGTATCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGG545940.4457404452260728No Hit
GGCGACGACGCGGGGGACGACGGGGCCCCGCGGGGAAGAGGGGAGGGCGG480370.3922048900488123No Hit
CGGCGACGGGTATCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCG452000.36904180174045664No Hit
CTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGT450410.36774362372105995No Hit
CGACGGGTATCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGGCC426270.34803417882279747No Hit
GGTGGAAGTGCGCCCGGCGGCGGCCGGTCGCCGGCCGGGGGGCGGTCCCC409060.3339828305751133No Hit
GCTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGG406540.33192534088399395No Hit
CGCGGCGACGGGTATCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTG390840.31910685352265505No Hit
GTTGGGTTAACAGAGAAGTTATAGGTGGATTATTTATAGTGTGATTATTG385730.31493472164899633No Hit
CCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATT375780.30681090322572746No Hit
ATCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGGCCGGAGGGCT371810.30356954049805135No Hit
GGGGGGGAAGAGAGGTGGCGACGACGCGGGGGACGACGGGGCCCCGCGGG371030.30293269845080006No Hit
GCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGGCCGGAGGGCTGTAAC370660.3026306067104373No Hit
TCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGGCCGGAGGGCTG349520.2853705543016027No Hit
CCCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATC348640.2846520658380372No Hit
AGCGCGGCGACGGGTATCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGC345790.28232514297308076No Hit
CAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCAG306950.25061367487662206No Hit
CCCCGTTTCCCAAGACGAACGGCTCTCCGCACCGGACCCCGGTCCCGACG302490.24697224470900606No Hit
GGGAAGAGAGGTGGCGACGACGCGGGGGACGACGGGGCCCCGCGGGGAAG296280.24190200225589048No Hit
CCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTG287410.23465996512881557No Hit
CCCGGGATTCGGCGAAAGCTGCGGCCGGAGGGCTGTAACACTCGGGGTGA283870.23176968199129078No Hit
GTCCGGGCCCCCCGCCCCACCGGGGGCCCGCTGGTTCCTCCCGCTCCGGA281360.22972035694180287No Hit
GTGGGAGAGCGGTCGCGCCGTGGGAGGGGCGGCCCGGCCCCCACCCCCAC269290.21986563449267163No Hit
GGGAGAGGGAGAGCGCGGCGACGGGTATCTGGCTTCCTCGGCCCCGGGAT269000.21962885988536027No Hit
GGCTCTCCGCACCGGACCCCGGTCCCGACGCCCGGCGGGGGGAGACCCCG267280.218224541524755No Hit
GTGGAAGTGCGCCCGGCGGCGGCCGGTCGCCGGCCGGGGGGCGGTCCCCC265920.21711415026288106No Hit
GGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCAGCA265890.21708965633798677No Hit
CCCCGAGCCACCTTCCCCACCGGGCCTTCCCGGCCGTCCCGGAGCCGGTC262760.21453412350735043No Hit
CCCCACTACCACAAATTATGCAGTCGAGTTTCCCGCATTTGGGGAAATCG260350.21256644487417675No Hit
CCCGAGTGTCCGGGCCCCCCGCCCCACCGGGGGCCCGCTGGTTCCTCCCG259210.2116356757281942No Hit
GGGGTCTCGCTATGTTGCCCAGGCTGGAGTGCAGTGGCTATTCACAGGCG253230.2067532200326014No Hit
GTCGGCTGCTAGGCGCCGGCCGAGGCGAGGCGCCGCGCGGAAAACCGCGG245150.20015618959440917No Hit
GTTGCCCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACT243390.1987192126672782No Hit
ACGGGTATCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGGCCGG241360.1970617904160987No Hit
GGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGCGGCCCGGCCCCCACCCCC239580.1956084842057049No Hit
CCCGTTTCCCAAGACGAACGGCTCTCCGCACCGGACCCCGGTCCCGACGC228130.1862599695377221No Hit
TGGCTATTCACAGGCGCGATCCCACTACTGATCAGCACGGGAGTTTTGAC224870.18359829636587718No Hit
GCTCTCCGCACCGGACCCCGGTCCCGACGCCCGGCGGGGGGAGACCCCGC224250.18309208858472875No Hit
GGGGGGGTGGAGCGAGGCCCCGCGGGGAGGGGACCCGCGCCGGCACCCGC220920.1803732629214639No Hit
GGCGACGGAGGGGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGCGGCCCG219980.17960578660810986No Hit
GTGATTATTGCCTATAGTCTGATTAACTAACAATGGTTATCCGAGTTGTT207810.1696694177426644No Hit
GGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGGCCGGAGGGCTGTAA207320.1692693503027245No Hit
GCCCGGGGGGCGGACCCGGCGGGGGAACACCGACGCGGAGGTTCCCCCCA199490.16287643590531792No Hit
GGGAGAGCGGTCGCGCCGTGGGAGGGGCGGCCCGGCCCCCACCCCCACGC196250.16023109201673588No Hit
GGGGGGTGGAGCGAGGCCCCGCGGGGAGGGGACCCGCGCCGGCACCCGCC196000.16002697597595023No Hit
CTATAGTCTGATTAACTAACAATGGTTATCCGAGTTGTTATACGCGTATG193590.15805929734277654No Hit
GGTATCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGGCCGGAGG187110.15276860956561247No Hit
CCGAGTTGTTATACGCGTATGCCTGGAGAATTGGAATTCTTGTTACTCAT184930.1509887176899616No Hit
GGTGGGAGAGCGGTCGCGCCGTGGGAGGGGCGGCCCGGCCCCCACCCCCA181920.1485311605589024No Hit
GGGGAGAGGGAGAGCGCGGCGACGGGTATCTGGCTTCCTCGGCCCCGGGA179290.14638385980983734No Hit
GCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCAGCACGGGAGTTT177800.14516732820675485No Hit
CCCCGAGTGTCCGGGCCCCCCGCCCCACCGGGGGCCCGCTGGTTCCTCCC175890.14360788165515248No Hit
CGGGATTCGGCGAAAGCTGCGGCCGGAGGGCTGTAACACTCGGGGTGAGG172690.14099519633309615No Hit
CCCCGGGATTCGGCGAAAGCTGCGGCCGGAGGGCTGTAACACTCGGGGTG172110.14052164711847343No Hit
GTATCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGGCCGGAGGG169170.13812124247883417No Hit
CGGCTCTCCGCACCGGACCCCGGTCCCGACGCCCGGCGGGGGGAGACCCC164450.1342675316288011No Hit
GCCTATAGTCTGATTAACTAACAATGGTTATCCGAGTTGTTATACGCGTA163560.1335408785236042No Hit
GGCTATTCACAGGCGCGATCCCACTACTGATCAGCACGGGAGTTTTGACC160560.1310914860341764No Hit
CACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCAT159650.13034850364571662No Hit
TTCCGGTGTTGGGTTAACAGAGAAGTTATAGGTGGATTATTTATAGTGTG159520.13024236330450806No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGCGGCCCGGCCCCCACCCC158710.12958102733236254No Hit
CCTATAGTCTGATTAACTAACAATGGTTATCCGAGTTGTTATACGCGTAT157970.12897684385163702No Hit
CCCCCACTACCACAAATTATGCAGTCGAGTTTCCCGCATTTGGGGAAATC152950.12487819375266117No Hit
GTCCCCCACTACCACAAATTATGCAGTCGAGTTTCCCGCATTTGGGGAAA151540.1237269792826301No Hit
GGGCCCCCCGCCCCACCGGGGGCCCGCTGGTTCCTCCCGCTCCGGAACCC148730.12143271498419937No Hit
CCTCGGCCCCGGGATTCGGCGAAAGCTGCGGCCGGAGGGCTGTAACACTC147400.12034681764721972No Hit
GTCCGCGGGGCCCGACGCCGCGGGGGCGAAACCCGGCGCGCGGAGGGGAG144020.11758716877579771No Hit
CCGGGCCCCCCGCCCCACCGGGGGCCCGCTGGTTCCTCCCGCTCCGGAAC138160.11280268877978206No Hit
GGAGGGGCGGCCCGGCCCCCACCCCCACGCCCGCCCGGGAGGCGGACGGG134830.1100838631165172No Hit
CCCCGACCCGCCCCCCGACGGGAAGAAGGAGGGGGGGAAGAGAGGTGGCG134280.10963480782678876No Hit
CTCGCTATGTTGCCCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATC134250.10961031390189448No Hit
GCGCGGCGACGGGTATCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCT130850.10683433574720962No Hit
GGGGGGAGAGGGAGAGCGCGGCGACGGGTATCTGGCTTCCTCGGCCCCGG130840.1068261711055782No Hit
CGGGGGGAGAGGGAGAGCGCGGCGACGGGTATCTGGCTTCCTCGGCCCCG130610.1066383843480554No Hit
CTCCTACTCGTCGCGGCGTAGCGTCCGCGGGGCCCGACGCCGCGGGGGCG124330.10151098940351987No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)