FastQCFastQC Report
Wed 13 Oct 2021
SRR11130947_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR11130947_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6159694
Sequences flagged as poor quality0
Sequence length150
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTGGGTTAACAGAGAAGTTATAGGTGGATTATTTATAGTGTGATTATTG4181136.787885891734232No Hit
CCGGTGTTGGGTTAACAGAGAAGTTATAGGTGGATTATTTATAGTGTGAT3596645.838991352492511No Hit
CTATAGTCTGATTAACTAACAATGGTTATCCGAGTTGTTATACGCGTATG1589302.580160637849867No Hit
GTGATTATTGCCTATAGTCTGATTAACTAACAATGGTTATCCGAGTTGTT1586812.5761182292497No Hit
GGTTAACAGAGAAGTTATAGGTGGATTATTTATAGTGTGATTATTGCCTA1215841.9738642861155116No Hit
CCTATAGTCTGATTAACTAACAATGGTTATCCGAGTTGTTATACGCGTAT1148021.8637614141221952No Hit
TTCCGGTGTTGGGTTAACAGAGAAGTTATAGGTGGATTATTTATAGTGTG1141061.8524621515289559No Hit
GTGGATTATTTATAGTGTGATTATTGCCTATAGTCTGATTAACTAACAAT1140171.8510172745594182No Hit
GGATTATTTATAGTGTGATTATTGCCTATAGTCTGATTAACTAACAATGG983501.5966702242026958No Hit
GCCTATAGTCTGATTAACTAACAATGGTTATCCGAGTTGTTATACGCGTA825061.3394496544795895No Hit
CGGGTATCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGGCCGGA711101.1544404640879888No Hit
TGTTGGGTTAACAGAGAAGTTATAGGTGGATTATTTATAGTGTGATTATT687101.1154774896285433No Hit
TCCGGTGTTGGGTTAACAGAGAAGTTATAGGTGGATTATTTATAGTGTGA672891.0924081618340131No Hit
GTTAACAGAGAAGTTATAGGTGGATTATTTATAGTGTGATTATTGCCTAT551950.8960672397037905No Hit
TGGGTTAACAGAGAAGTTATAGGTGGATTATTTATAGTGTGATTATTGCC534690.8680463672383726No Hit
CCGAGTTGTTATACGCGTATGCCTGGAGAATTGGAATTCTTGTTACTCAT508470.8254793176414282No Hit
GGGTTAACAGAGAAGTTATAGGTGGATTATTTATAGTGTGATTATTGCCT488490.7930426414039399No Hit
CGGTGTTGGGTTAACAGAGAAGTTATAGGTGGATTATTTATAGTGTGATT475750.7723597957950509No Hit
GTGTTGGGTTAACAGAGAAGTTATAGGTGGATTATTTATAGTGTGATTAT399640.6487984630405341No Hit
TGTGATTATTGCCTATAGTCTGATTAACTAACAATGGTTATCCGAGTTGT342110.5554009663467049No Hit
CTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGGCCGGAGGGCTGT337740.5483064580805475No Hit
ATCCGAGTTGTTATACGCGTATGCCTGGAGAATTGGAATTCTTGTTACTC307910.499878727741995No Hit
GGGTATCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGGCCGGAG302300.4907711324620995No Hit
ATTGCCTATAGTCTGATTAACTAACAATGGTTATCCGAGTTGTTATACGC286560.4652179150457798No Hit
GCGGCGACGGGTATCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGC283220.4597955677668404No Hit
GATTATTTATAGTGTGATTATTGCCTATAGTCTGATTAACTAACAATGGT271260.4403790188278833No Hit
GACGGGTATCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGGCCG240860.39102591784591895No Hit
GTCTGATTAACTAACAATGGTTATCCGAGTTGTTATACGCGTATGCCTGG235650.382567705473681No Hit
TAACAGAGAAGTTATAGGTGGATTATTTATAGTGTGATTATTGCCTATAG217050.3523714002676107No Hit
GCGACGGGTATCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGGC213000.34579639832757925No Hit
GGTCAATAAGATATGTTGATTTTACTTTGACTTGTAAGTCTAGGTTATAA201450.32704546686897107No Hit
GGTGGATTATTTATAGTGTGATTATTGCCTATAGTCTGATTAACTAACAA198800.3227433051057407No Hit
ATTATTTATAGTGTGATTATTGCCTATAGTCTGATTAACTAACAATGGTT193500.3141389815792798No Hit
TTGGGTTAACAGAGAAGTTATAGGTGGATTATTTATAGTGTGATTATTGC191980.31167132653018154No Hit
TGATTATTGCCTATAGTCTGATTAACTAACAATGGTTATCCGAGTTGTTA188530.30607039895163624No Hit
GGCATTCCGGTGTTGGGTTAACAGAGAAGTTATAGGTGGATTATTTATAG171790.278893724266173No Hit
CGTTGATCAAAATATATCTGGGTCAATAAGATATGTTGATTTTACTTTGA170520.27683193353436064No Hit
CCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCA165920.2693640300963003No Hit
GATTATTGCCTATAGTCTGATTAACTAACAATGGTTATCCGAGTTGTTAT164600.2672210665010307No Hit
CCGGGATTCGGCGAAAGCTGCGGCCGGAGGGCTGTAACACTCGGGGTGAG161250.2617824846493998No Hit
GGGGAAGAGAGGTGGCGACGACGCGGGGGACGACGGGGCCCCGCGGGGAA160030.25980186678104467No Hit
GGGGGAAGAGAGGTGGCGACGACGCGGGGGACGACGGGGCCCCGCGGGGA159940.2596557556268217No Hit
GGCGACGGGTATCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGG158970.25808100207575246No Hit
GTGGCGACGACGCGGGGGACGACGGGGCCCCGCGGGGAAGAGGGGAGGGC158310.2570095202781177No Hit
TATAGTCTGATTAACTAACAATGGTTATCCGAGTTGTTATACGCGTATGC152760.24799933243437092No Hit
GTTCCAGAAGAGCTGTCCCTCTTTTGGCTATAATCTAAACTTACTTTTTG152410.2474311223901707No Hit
TTCCGTTCCAGAAGAGCTGTCCCTCTTTTGGCTATAATCTAAACTTACTT144230.23415124192857634No Hit
GTGGCTATTCACAGGCGCGATCCCACTACTGATCAGCACGGGAGTTTTGA138250.2244429674590978No Hit
TTAACAGAGAAGTTATAGGTGGATTATTTATAGTGTGATTATTGCCTATA135750.22038432428623891No Hit
GGGGGGAAGAGAGGTGGCGACGACGCGGGGGACGACGGGGCCCCGCGGGG133450.21665037256720868No Hit
GTGTGATTATTGCCTATAGTCTGATTAACTAACAATGGTTATCCGAGTTG129750.2106435806713775No Hit
CGGCGACGGGTATCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCG124500.20212043000837376No Hit
CGACGGGTATCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGGCC124490.20210419543568234No Hit
TGCCTATAGTCTGATTAACTAACAATGGTTATCCGAGTTGTTATACGCGT124480.2020879608629909No Hit
CCCGGTGTTGGGTTAACAGAGAAGTTATAGGTGGATTATTTATAGTGTGA122570.19898715747892673No Hit
GTCCGTTGATCAAAATATATCTGGGTCAATAAGATATGTTGATTTTACTT120480.19559413178641666No Hit
ATCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGGCCGGAGGGCT118360.1921524023758323No Hit
GGTGTTGGGTTAACAGAGAAGTTATAGGTGGATTATTTATAGTGTGATTA118330.192103698657758No Hit
TCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGGCCGGAGGGCTG114200.18539882013619507No Hit
GCTGTTTTGTTAATTATTCACTATTAAAGGTTTTTTCCGTTCCAGAAGAG113860.1848468446646863No Hit
GTTTTGTTAATTATTCACTATTAAAGGTTTTTTCCGTTCCAGAAGAGCTG112950.1833694985497656No Hit
CACTATTAAAGGTTTTTTCCGTTCCAGAAGAGCTGTCCCTCTTTTGGCTA112790.18310974538670266No Hit
GCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGGCCGGAGGGCTGTAAC112540.18270388106941676No Hit
CGCGGCGACGGGTATCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTG110090.17872641076001503No Hit
GTTGTTATACGCGTATGCCTGGAGAATTGGAATTCTTGTTACTCATACTA108450.17606394083861956No Hit
GCCCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGAT105570.17138838390348612No Hit
ATTTATAGTGTGATTATTGCCTATAGTCTGATTAACTAACAATGGTTATC105540.17133968018541182No Hit
GGGTCAATAAGATATGTTGATTTTACTTTGACTTGTAAGTCTAGGTTATA104410.16950517347127958No Hit
TGATTAACTAACAATGGTTATCCGAGTTGTTATACGCGTATGCCTGGAGA104120.16903437086322795No Hit
AGTTGTTATACGCGTATGCCTGGAGAATTGGAATTCTTGTTACTCATACT100740.1635470852935227No Hit
ATTCCGGTGTTGGGTTAACAGAGAAGTTATAGGTGGATTATTTATAGTGT100460.1630925172581625No Hit
ATTCACTATTAAAGGTTTTTTCCGTTCCAGAAGAGCTGTCCCTCTTTTGG100260.16276782580433377No Hit
CTGTTTTGTTAATTATTCACTATTAAAGGTTTTTTCCGTTCCAGAAGAGC98030.15914751609414363No Hit
TCCGAGTTGTTATACGCGTATGCCTGGAGAATTGGAATTCTTGTTACTCA97030.15752405882500006No Hit
GCATTCCGGTGTTGGGTTAACAGAGAAGTTATAGGTGGATTATTTATAGT96380.15646881160005674No Hit
GGCGACGACGCGGGGGACGACGGGGCCCCGCGGGGAAGAGGGGAGGGCGG95870.15564084839279352No Hit
CAGAGAAGTTATAGGTGGATTATTTATAGTGTGATTATTGCCTATAGTCT95180.1545206628770845No Hit
GATTAACTAACAATGGTTATCCGAGTTGTTATACGCGTATGCCTGGAGAA92900.15081918030343716No Hit
CTCCTACTCGTCGCGGCGTAGCGTCCGCGGGGCCCGACGCCGCGGGGGCG92320.1498775750873339No Hit
TGGATTATTTATAGTGTGATTATTGCCTATAGTCTGATTAACTAACAATG92170.14963405649696235No Hit
AGCGCGGCGACGGGTATCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGC91970.14930936504313363No Hit
CCCCGTTTCCCAAGACGAACGGCTCTCCGCACCGGACCCCGGTCCCGACG91630.14875738957162482No Hit
CTGATTAACTAACAATGGTTATCCGAGTTGTTATACGCGTATGCCTGGAG90610.1471014631570984No Hit
AGGCATTCCGGTGTTGGGTTAACAGAGAAGTTATAGGTGGATTATTTATA90200.14643584567674953No Hit
TCACTATTAAAGGTTTTTTCCGTTCCAGAAGAGCTGTCCCTCTTTTGGCT89420.14516954900681756No Hit
CCCCGAGCCACCTTCCCCACCGGGCCTTCCCGGCCGTCCCGGAGCCGGTC87490.14203627647737047No Hit
CTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGT87270.1416791158781589No Hit
CGAGTTGTTATACGCGTATGCCTGGAGAATTGGAATTCTTGTTACTCATA82050.13320466893322946No Hit
GCTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGG79790.129535655504965No Hit
AGTCTGATTAACTAACAATGGTTATCCGAGTTGTTATACGCGTATGCCTG78570.12755503763660989No Hit
GGGAGAGGGAGAGCGCGGCGACGGGTATCTGGCTTCCTCGGCCCCGGGAT78320.127149173319324No Hit
CCCGGGATTCGGCGAAAGCTGCGGCCGGAGGGCTGTAACACTCGGGGTGA77340.1255581851955633No Hit
CCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATAT75900.12322040672799654No Hit
ACGGGTATCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGGCCGG73900.11997349218970943No Hit
GTCAATAAGATATGTTGATTTTACTTTGACTTGTAAGTCTAGGTTATAAT73340.11906435611898902No Hit
GTGGGAGAGCGGTCGCGCCGTGGGAGGGGCGGCCCGGCCCCCACCCCCAC72540.11776559030367419No Hit
CGCCTATAGTCTGATTAACTAACAATGGTTATCCGAGTTGTTATACGCGT72430.11758701000406839No Hit
CCCCGCCCCACCGGGGGCCCGCTGGTTCCTCCCGCTCCGGAACCCCCGCG71680.11636941705221071No Hit
TTTCCGTTCCAGAAGAGCTGTCCCTCTTTTGGCTATAATCTAAACTTACT69150.1122620701612775No Hit
GGCGACGGAGGGGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGCGGCCCG67950.1103139214383052No Hit
TATTTATAGTGTGATTATTGCCTATAGTCTGATTAACTAACAATGGTTAT67600.10974571139410498No Hit
GGTGGAAGTGCGCCCGGCGGCGGCCGGTCGCCGGCCGGGGGGCGGTCCCC67440.109485958231042No Hit
CCCGTTTCCCAAGACGAACGGCTCTCCGCACCGGACCCCGGTCCCGACGC67020.1088041061780017No Hit
GTCGGCTGCTAGGCGCCGGCCGAGGCGAGGCGCCGCGCGGAAAACCGCGG66760.10838200728802438No Hit
CAATAAGATATGTTGATTTTACTTTGACTTGTAAGTCTAGGTTATAATCA66710.1083008344245672No Hit
ATTATTGCCTATAGTCTGATTAACTAACAATGGTTATCCGAGTTGTTATA66040.10721311805424101No Hit
CCCCACTACCACAAATTATGCAGTCGAGTTTCCCGCATTTGGGGAAATCG64720.1050701544589715No Hit
GGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGCGGCCCGGCCCCCACCCCC64040.10396620351595387No Hit
CCTCCTACTCGTCGCGGCGTAGCGTCCGCGGGGCCCGACGCCGCGGGGGC63630.103300586035605No Hit
GGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGGCCGGAGGGCTGTAA63580.10321941317214783No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)