FastQCFastQC Report
Wed 13 Oct 2021
SRR11130945_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR11130945_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9970040
Sequences flagged as poor quality0
Sequence length150
%GC58

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGGTATCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGGCCGGA2857262.865846074840221No Hit
CCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCA1348721.3527729076312631No Hit
CTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGGCCGGAGGGCTGT1148101.151550043931619No Hit
CCGGTGTTGGGTTAACAGAGAAGTTATAGGTGGATTATTTATAGTGTGAT1126591.1299754063173268No Hit
GGGTATCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGGCCGGAG1061271.064459119522088No Hit
GGGGAAGAGAGGTGGCGACGACGCGGGGGACGACGGGGCCCCGCGGGGAA1033171.0362746789380985No Hit
GTGGCTATTCACAGGCGCGATCCCACTACTGATCAGCACGGGAGTTTTGA935770.9385819916469744No Hit
GGGGGAAGAGAGGTGGCGACGACGCGGGGGACGACGGGGCCCCGCGGGGA906640.909364455909906No Hit
GTGGCGACGACGCGGGGGACGACGGGGCCCCGCGGGGAAGAGGGGAGGGC895530.8982210703266987No Hit
CCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATAT891030.8937075478132485No Hit
CCGGGATTCGGCGAAAGCTGCGGCCGGAGGGCTGTAACACTCGGGGTGAG749140.7513911679391457No Hit
GGGGGGAAGAGAGGTGGCGACGACGCGGGGGACGACGGGGCCCCGCGGGG701980.7040894519981865No Hit
GCCCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGAT686820.688883896152874No Hit
CTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGT683240.6852931382421735No Hit
GACGGGTATCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGGCCG680720.6827655656346414No Hit
GTTGGGTTAACAGAGAAGTTATAGGTGGATTATTTATAGTGTGATTATTG636920.6388339465037252No Hit
GGCGACGACGCGGGGGACGACGGGGCCCCGCGGGGAAGAGGGGAGGGCGG597060.5988541670845855No Hit
CCCCACTACCACAAATTATGCAGTCGAGTTTCCCGCATTTGGGGAAATCG579810.5815523307830259No Hit
GCGGCGACGGGTATCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGC577860.5795964710271975No Hit
CCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATT535130.5367380672494795No Hit
CGACGGGTATCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGGCC471120.47253571700815644No Hit
GCTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGG464260.4656551026876522No Hit
ATCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGGCCGGAGGGCT436040.4373503015033039No Hit
GCGACGGGTATCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGGC435410.43671840835142084No Hit
GGCGACGGGTATCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGG425870.4271497406229062No Hit
CCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTG421670.4229371196103526No Hit
CCCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATC409090.4103193166727515No Hit
CGGCGACGGGTATCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCG403910.4051237507572688No Hit
CAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCAG397140.39833340688703356No Hit
CCCGGGATTCGGCGAAAGCTGCGGCCGGAGGGCTGTAACACTCGGGGTGA361460.36254618838038766No Hit
GGGGTCTCGCTATGTTGCCCAGGCTGGAGTGCAGTGGCTATTCACAGGCG360460.3615431833773987No Hit
CTATAGTCTGATTAACTAACAATGGTTATCCGAGTTGTTATACGCGTATG359900.36098150057572487No Hit
GGGAAGAGAGGTGGCGACGACGCGGGGGACGACGGGGCCCCGCGGGGAAG353580.3546425089568347No Hit
GTGATTATTGCCTATAGTCTGATTAACTAACAATGGTTATCCGAGTTGTT335570.33657838885300356No Hit
CCCCCACTACCACAAATTATGCAGTCGAGTTTCCCGCATTTGGGGAAATC315930.3168793705943005No Hit
TGGCTATTCACAGGCGCGATCCCACTACTGATCAGCACGGGAGTTTTGAC302200.30310811190326215No Hit
GCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGGCCGGAGGGCTGTAAC299250.30014924714444474No Hit
CCGAGTTGTTATACGCGTATGCCTGGAGAATTGGAATTCTTGTTACTCAT293200.2940810668763616No Hit
GGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCAGCA288550.28941709361246293No Hit
TCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGGCCGGAGGGCTG287440.2883037580591452No Hit
CGCGGCGACGGGTATCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTG285940.28679925055466177No Hit
GTCCCCCACTACCACAAATTATGCAGTCGAGTTTCCCGCATTTGGGGAAA275710.27653850937408475No Hit
GGGAGAGGGAGAGCGCGGCGACGGGTATCTGGCTTCCTCGGCCCCGGGAT252620.2533791238550698No Hit
GGGGGGGAAGAGAGGTGGCGACGACGCGGGGGACGACGGGGCCCCGCGGG250870.25162386509983914No Hit
AGCGCGGCGACGGGTATCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGC248910.2496579752939808No Hit
CCTATAGTCTGATTAACTAACAATGGTTATCCGAGTTGTTATACGCGTAT248180.24892578164179882No Hit
CGGGATTCGGCGAAAGCTGCGGCCGGAGGGCTGTAACACTCGGGGTGAGG244570.2453049335810087No Hit
GTTGCCCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACT211500.21213555813216398No Hit
ACGGGTATCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGGCCGG208560.2091867234233764No Hit
GCCTATAGTCTGATTAACTAACAATGGTTATCCGAGTTGTTATACGCGTA205150.20576647636318413No Hit
GGCTATTCACAGGCGCGATCCCACTACTGATCAGCACGGGAGTTTTGACC201270.20187481695158696No Hit
CCCCGGGATTCGGCGAAAGCTGCGGCCGGAGGGCTGTAACACTCGGGGTG200610.20121283364961423No Hit
CACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCAT198990.19958796554477215No Hit
TTCCGGTGTTGGGTTAACAGAGAAGTTATAGGTGGATTATTTATAGTGTG198220.19881565169247067No Hit
CCTCGGCCCCGGGATTCGGCGAAAGCTGCGGCCGGAGGGCTGTAACACTC197090.19768225603909312No Hit
CTCGCTATGTTGCCCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATC192970.19354987542677865No Hit
GGTATCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGGCCGGAGG191700.19227605907298265No Hit
GTATCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGGCCGGAGGG191190.19176452652145828No Hit
GGTTAACAGAGAAGTTATAGGTGGATTATTTATAGTGTGATTATTGCCTA188590.189156713513687No Hit
GGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGGCCGGAGGGCTGTAA184640.18519484375188064No Hit
CTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGA179030.1795679856851126No Hit
CCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATG176680.17721092392808854No Hit
GTGGGAGAGCGGTCGCGCCGTGGGAGGGGCGGCCCGGCCCCCACCCCCAC165000.16549582549317757No Hit
GGGGAGAGGGAGAGCGCGGCGACGGGTATCTGGCTTCCTCGGCCCCGGGA162530.16301840313579483No Hit
CCCACTACCACAAATTATGCAGTCGAGTTTCCCGCATTTGGGGAAATCGC161830.16231629963370256No Hit
GCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCAGCACGGGAGTTT158260.158735571773032No Hit
GTGGATTATTTATAGTGTGATTATTGCCTATAGTCTGATTAACTAACAAT146940.14738155513919704No Hit
AGTGGCTATTCACAGGCGCGATCCCACTACTGATCAGCACGGGAGTTTTG143640.14407163862933348No Hit
CCCCGACCCGCCCCCCGACGGGAAGAAGGAGGGGGGGAAGAGAGGTGGCG142410.14283794247565706No Hit
GGATTATTTATAGTGTGATTATTGCCTATAGTCTGATTAACTAACAATGG141130.1415540960718312No Hit
TCCGGTGTTGGGTTAACAGAGAAGTTATAGGTGGATTATTTATAGTGTGA140260.1406814817192308No Hit
GGAAGAGAGGTGGCGACGACGCGGGGGACGACGGGGCCCCGCGGGGAAGA139670.14008970876746735No Hit
CTCGGCCCCGGGATTCGGCGAAAGCTGCGGCCGGAGGGCTGTAACACTCG139470.13988910776686955No Hit
GGCATTCCGGTGTTGGGTTAACAGAGAAGTTATAGGTGGATTATTTATAG136260.136669461707275No Hit
TATCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGGCCGGAGGGC135890.13629834985616907No Hit
GTCTCGCTATGTTGCCCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGA135380.1357868173046447No Hit
GGGAGAGAGAGAGAGCGCGGCGACGGGTATCTGGCTTCCTCGGCCCCGGG129830.130220139538056No Hit
CCACAAATTATGCAGTCGAGTTTCCCGCATTTGGGGAAATCGCAGGGGTC124500.12487412287212488No Hit
GTCCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGAT121490.12185507781312813No Hit
GGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGCGGCCCGGCCCCCACCCCC118130.11848498100308524No Hit
CGGTGTTGGGTTAACAGAGAAGTTATAGGTGGATTATTTATAGTGTGATT117940.11829441005251735No Hit
CTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGGCCGGAGGGCTGTAACA112290.11262743178562976No Hit
GGTCTCGCTATGTTGCCCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCG110520.1108521129303393No Hit
GTCGAGTTTCCCGCATTTGGGGAAATCGCAGGGGTCAGCACATCCGGAGT110290.11062142177965184No Hit
GGGGGGAGAGGGAGAGCGCGGCGACGGGTATCTGGCTTCCTCGGCCCCGG108980.1093074852257363No Hit
CGGGGGGAGAGGGAGAGCGCGGCGACGGGTATCTGGCTTCCTCGGCCCCG107750.10807378907205989No Hit
CCCCGACCCGCCCCCCGACGGGAAGAAGGAGGGGGGAAGAGAGGTGGCGA106040.10635865051694879No Hit
GGGAGAGCGGTCGCGCCGTGGGAGGGGCGGCCCGGCCCCCACCCCCACGC104350.10466357206189744No Hit
GGTGGGAGAGCGGTCGCGCCGTGGGAGGGGCGGCCCGGCCCCCACCCCCA103660.10397149860983507No Hit
GGGGGAGAGAGAGAGAGCGCGGCGACGGGTATCTGGCTTCCTCGGCCCCG102710.10301864385699555No Hit
TGTTGGGTTAACAGAGAAGTTATAGGTGGATTATTTATAGTGTGATTATT102090.10239678075514241No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)