FastQCFastQC Report
Wed 13 Oct 2021
SRR11130943_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR11130943_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13490413
Sequences flagged as poor quality0
Sequence length150
%GC64

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGGTATCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGGCCGGA3641292.6991686614783403No Hit
CTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGGCCGGAGGGCTGT1820331.349350831586846No Hit
GCGGCGACGGGTATCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGC1689301.2522225968915852No Hit
GTGGCGACGACGCGGGGGACGACGGGGCCCCGCGGGGAAGAGGGGAGGGC1562371.1581335575122869No Hit
GGGTATCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGGCCGGAG1561861.157755511265667No Hit
GGGGAAGAGAGGTGGCGACGACGCGGGGGACGACGGGGCCCCGCGGGGAA1463161.0845924435374958No Hit
CCGGTGTTGGGTTAACAGAGAAGTTATAGGTGGATTATTTATAGTGTGAT1428221.0586925693082931No Hit
GGGGGAAGAGAGGTGGCGACGACGCGGGGGACGACGGGGCCCCGCGGGGA1404941.041435870050828No Hit
GCGACGGGTATCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGGC1265900.9383700854821865No Hit
GGGGGGAAGAGAGGTGGCGACGACGCGGGGGACGACGGGGCCCCGCGGGG1159760.8596919901562687No Hit
CCGGGATTCGGCGAAAGCTGCGGCCGGAGGGCTGTAACACTCGGGGTGAG1154550.8558299883035456No Hit
GACGGGTATCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGGCCG1143460.847609335607442No Hit
GGCGACGACGCGGGGGACGACGGGGCCCCGCGGGGAAGAGGGGAGGGCGG1033890.7663886939562191No Hit
GTGGCTATTCACAGGCGCGATCCCACTACTGATCAGCACGGGAGTTTTGA991380.7348774273997394No Hit
CCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCA931020.690134542211569No Hit
CCCCGAGCCACCTTCCCCACCGGGCCTTCCCGGCCGTCCCGGAGCCGGTC914960.6782297917787987No Hit
GTTGGGTTAACAGAGAAGTTATAGGTGGATTATTTATAGTGTGATTATTG863090.6397802646961216No Hit
CTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGT824920.6114860975716607No Hit
GGCGACGGGTATCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGG799750.5928284034002518No Hit
CCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATAT795850.5899374615143361No Hit
GCTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGG760580.5637929691255561No Hit
TCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGGCCGGAGGGCTG672180.49826495304480295No Hit
GCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGGCCGGAGGGCTGTAAC661390.49026668049376987No Hit
CGGCGACGGGTATCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCG660990.489970173633676No Hit
CGACGGGTATCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGGCC636150.4715570976218445No Hit
CGCGGCGACGGGTATCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTG617370.4576361005404357No Hit
ATCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGGCCGGAGGGCT615280.456086852196445No Hit
GGTGGAAGTGCGCCCGGCGGCGGCCGGTCGCCGGCCGGGGGGCGGTCCCC537880.3987127747682743No Hit
GCCCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGAT537450.3983940298936734No Hit
CCCCACTACCACAAATTATGCAGTCGAGTTTCCCGCATTTGGGGAAATCG535980.3973043671828283No Hit
GGGAGAGGGAGAGCGCGGCGACGGGTATCTGGCTTCCTCGGCCCCGGGAT535720.3971116377237673No Hit
CCGAGTTGTTATACGCGTATGCCTGGAGAATTGGAATTCTTGTTACTCAT502330.3723607275774285No Hit
CCCGGGATTCGGCGAAAGCTGCGGCCGGAGGGCTGTAACACTCGGGGTGA498870.3697959432376162No Hit
GGGAAGAGAGGTGGCGACGACGCGGGGGACGACGGGGCCCCGCGGGGAAG497090.36847648771019836No Hit
CCCCGTTTCCCAAGACGAACGGCTCTCCGCACCGGACCCCGGTCCCGACG480570.35623075438832No Hit
GGGAGAGAGAGAGAGCGCGGCGACGGGTATCTGGCTTCCTCGGCCCCGGG479670.35556361395310876No Hit
GTGGGAGAGCGGTCGCGCCGTGGGAGGGGCGGCCCGGCCCCCACCCCCAC473140.3507231394620758No Hit
GGGGGGGTGGAGCGAGGCCCCGCGGGGAGGGGACCCGCGCCGGCACCCGC471040.3491664784465828No Hit
AGCGCGGCGACGGGTATCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGC470230.3485660520548926No Hit
CCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATT460080.3410421904800098No Hit
GGCGACGGAGGGGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGCGGCCCG446570.3310276712803381No Hit
GGGGGGGAAGAGAGGTGGCGACGACGCGGGGGACGACGGGGCCCCGCGGG428980.31798878210770865No Hit
GCTCTCCGCACCGGACCCCGGTCCCGACGCCCGGCGGGGGGAGACCCCGC426310.3160095988165818No Hit
GGCTCTCCGCACCGGACCCCGGTCCCGACGCCCGGCGGGGGGAGACCCCG426000.31577980600000904No Hit
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGC424820.31490511076273203TruSeq Adapter, Index 2 (100% over 50bp)
GGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGCGGCCCGGCCCCCACCCCC421210.3122291363503845No Hit
GGGGGGTGGAGCGAGGCCCCGCGGGGAGGGGACCCGCGCCGGCACCCGCC420020.31134702844160517No Hit
GTGATTATTGCCTATAGTCTGATTAACTAACAATGGTTATCCGAGTTGTT415740.3081744050386004No Hit
CCCCGCCCCACCGGGGGCCCGCTGGTTCCTCCCGCTCCGGAACCCCCGCG401290.29746309471770804No Hit
GGGGGAGAGAGAGAGAGCGCGGCGACGGGTATCTGGCTTCCTCGGCCCCG400220.29666993886695686No Hit
CCCGTTTCCCAAGACGAACGGCTCTCCGCACCGGACCCCGGTCCCGACGC383620.28436490417305976No Hit
CTATAGTCTGATTAACTAACAATGGTTATCCGAGTTGTTATACGCGTATG381910.28309733734615833No Hit
GGGGAGAGGGAGAGCGCGGCGACGGGTATCTGGCTTCCTCGGCCCCGGGA358730.2659147648037165No Hit
GGGGAGAGAGAGAGAGCGCGGCGACGGGTATCTGGCTTCCTCGGCCCCGG357320.2648695781218855No Hit
CGGGATTCGGCGAAAGCTGCGGCCGGAGGGCTGTAACACTCGGGGTGAGG356060.2639355815125897No Hit
GTGGAAGTGCGCCCGGCGGCGGCCGGTCGCCGGCCGGGGGGCGGTCCCCC355780.263728026710524No Hit
ACGGGTATCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGGCCGG354880.2630608862753127No Hit
TTCCGGTGTTGGGTTAACAGAGAAGTTATAGGTGGATTATTTATAGTGTG348500.2583316018568149No Hit
CCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTG346190.2566192747397726No Hit
CTCCTACTCGTCGCGGCGTAGCGTCCGCGGGGCCCGACGCCGCGGGGGCG344170.2551219150962984No Hit
TGGCTATTCACAGGCGCGATCCCACTACTGATCAGCACGGGAGTTTTGAC331160.2454780294717441No Hit
GTCCCCCACTACCACAAATTATGCAGTCGAGTTTCCCGCATTTGGGGAAA331090.24542614077122768No Hit
GGGAGAGCGGTCGCGCCGTGGGAGGGGCGGCCCGGCCCCCACCCCCACGC331000.24535942672770655No Hit
GGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGGCCGGAGGGCTGTAA323490.2397925104294435No Hit
GGTGGGAGAGCGGTCGCGCCGTGGGAGGGGCGGCCCGGCCCCCACCCCCA320290.23742045554869226No Hit
GGTATCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGGCCGGAGG310250.22997813336033524No Hit
CGGCTCTCCGCACCGGACCCCGGTCCCGACGCCCGGCGGGGGGAGACCCC298700.2214164977751237No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGCGGCCCGGCCCCCACCCC296290.2196300439430579No Hit
CCCCCACTACCACAAATTATGCAGTCGAGTTTCCCGCATTTGGGGAAATC296220.21957815524254148No Hit
CCTATAGTCTGATTAACTAACAATGGTTATCCGAGTTGTTATACGCGTAT296210.21957074257103917No Hit
GCCTATAGTCTGATTAACTAACAATGGTTATCCGAGTTGTTATACGCGTA292510.21682805411517053No Hit
CCCCGGGATTCGGCGAAAGCTGCGGCCGGAGGGCTGTAACACTCGGGGTG286320.21223961045521733No Hit
GCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCAGCACGGGAGTTT283110.20986014290296376No Hit
GTATCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGGCCGGAGGG279950.20751773870822193No Hit
GTCCGCGGGGCCCGACGCCGCGGGGGCGAAACCCGGCGCGCGGAGGGGAG278080.2061315691372829No Hit
CGGGGGGAGAGGGAGAGCGCGGCGACGGGTATCTGGCTTCCTCGGCCCCG277230.20550149205958335No Hit
GGGGTCTCGCTATGTTGCCCAGGCTGGAGTGCAGTGGCTATTCACAGGCG276830.20520498519948946No Hit
GGGGGGAGAGGGAGAGCGCGGCGACGGGTATCTGGCTTCCTCGGCCCCGG276000.20458973346479456No Hit
CCCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATC261180.1936041542983154No Hit
GTCGGCTGCTAGGCGCCGGCCGAGGCGAGGCGCCGCGCGGAAAACCGCGG258230.19141741620512287No Hit
CAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCAG251460.1863990375980335No Hit
GGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCAGCA237360.17594717077972336No Hit
GCGACGGAGGGGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGCGGCCCGG235860.17483527005437122No Hit
TCCGGTGTTGGGTTAACAGAGAAGTTATAGGTGGATTATTTATAGTGTGA231840.17185537611042745No Hit
GGAGAGAGAGAGAGCGCGGCGACGGGTATCTGGCTTCCTCGGCCCCGGGA229170.16987619281930064No Hit
CCTCCTACTCGTCGCGGCGTAGCGTCCGCGGGGCCCGACGCCGCGGGGGC229100.16982430411878421No Hit
CCTCGGCCCCGGGATTCGGCGAAAGCTGCGGCCGGAGGGCTGTAACACTC227100.16834176981831467No Hit
GCGCGGCGACGGGTATCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCT225660.16727434512197661No Hit
GCGACGACGCGGGGGACGACGGGGCCCCGCGGGGAAGAGGGGAGGGCGGG223860.16594006425155405No Hit
CCCCACCGGGCCTTCCCGGCCGTCCCGGAGCCGGTCGCGGCGCACCGCCA223770.16587335020803293No Hit
GGCTATTCACAGGCGCGATCCCACTACTGATCAGCACGGGAGTTTTGACC222310.16479110016869017No Hit
GGTTAACAGAGAAGTTATAGGTGGATTATTTATAGTGTGATTATTGCCTA219780.16291569427859623No Hit
TATCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGGCCGGAGGGC210210.1558217676508495No Hit
GGGGGGAGAGAGAGAGAGCGCGGCGACGGGTATCTGGCTTCCTCGGCCCC206210.1528566990499105No Hit
GGCGGACGGGGGGAGAGGGAGAGCGCGGCGACGGGTATCTGGCTTCCTCG203220.15064031027070854No Hit
GTCCCGGAGCCGGTCGCGGCGCACCGCCACGGTGGAAGTGCGCCCGGCGG202410.15003988387901837No Hit
GGCGGACGGGGGGAGAGAGAGAGAGCGCGGCGACGGGTATCTGGCTTCCT200980.14897987185418268No Hit
GGAGAGGGAGAGCGCGGCGACGGGTATCTGGCTTCCTCGGCCCCGGGATT198480.14712670397859576No Hit
CCCAAGACGAACGGCTCTCCGCACCGGACCCCGGTCCCGACGCCCGGCGG198410.14707481527807933No Hit
CACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCAT196850.14591843852371308No Hit
GTGGATTATTTATAGTGTGATTATTGCCTATAGTCTGATTAACTAACAAT196120.14537731350404173No Hit
GCCACCTTCCCCACCGGGCCTTCCCGGCCGTCCCGGAGCCGGTCGCGGCG196100.14536248816103703No Hit
GGGGGAGAGGGAGAGCGCGGCGACGGGTATCTGGCTTCCTCGGCCCCGGG191850.1422121027725393No Hit
CGGGGGGAGAGAGAGAGAGCGCGGCGACGGGTATCTGGCTTCCTCGGCCC179870.13333172231272683No Hit
TGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGGCCGGAGGGCTGTA178090.13201226678530895No Hit
CGACGGAGGGGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGCGGCCCGGC177150.13131547566408827No Hit
GGAAGAGAGGTGGCGACGACGCGGGGGACGACGGGGCCCCGCGGGGAAGA175960.1304333677553089No Hit
GGGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGCGGCCCGGCCCCCACCC173030.12826145500512104No Hit
GAGAGGGAGAGCGCGGCGACGGGTATCTGGCTTCCTCGGCCCCGGGATTC168230.12470337268399417No Hit
GGATTATTTATAGTGTGATTATTGCCTATAGTCTGATTAACTAACAATGG167220.12395469286225708No Hit
CGGCGAAAGCTGCGGCCGGAGGGCTGTAACACTCGGGGTGAGGTGGTTCG166100.12312447365399412No Hit
CTCGGCCCCGGGATTCGGCGAAAGCTGCGGCCGGAGGGCTGTAACACTCG165650.12279090343638849No Hit
GGCATTCCGGTGTTGGGTTAACAGAGAAGTTATAGGTGGATTATTTATAG164830.12218306437319598No Hit
GAGAGAGAGAGCGCGGCGACGGGTATCTGGCTTCCTCGGCCCCGGGATTC163470.12117494104887672No Hit
GTTGCCCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACT162090.12015199238155275No Hit
GGAGGGGCGGCCCGGCCCCCACCCCCACGCCCGCCCGGGAGGCGGACGGG159820.11846931595051982No Hit
GGCGAAAGCTGCGGCCGGAGGGCTGTAACACTCGGGGTGAGGTGGTTCGG159690.11837295122098931No Hit
CTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGGCCGGAGGGCTGTAACA159490.11822469779094234No Hit
TTCCGTTCCAGAAGAGCTGTCCCTCTTTTGGCTATAATCTAAACTTACTT156950.11634187922934605No Hit
CGGTGTTGGGTTAACAGAGAAGTTATAGGTGGATTATTTATAGTGTGATT154370.11442940998174037No Hit
AGTGGCTATTCACAGGCGCGATCCCACTACTGATCAGCACGGGAGTTTTG153740.11396241167709247No Hit
GCCCGGGGGGCGGACCCGGCGGGGGAACACCGACGCGGAGGTTCCCCCCA151600.11237609997559007No Hit
CCGGCCGCACCCCGTTTCCCAAGACGAACGGCTCTCCGCACCGGACCCCG151070.11198322838596565No Hit
ACGGCTCTCCGCACCGGACCCCGGTCCCGACGCCCGGCGGGGGGAGACCC150220.1113531513082661No Hit
GTCGCGGCGTAGCGTCCGCGGGGCCCGACGCCGCGGGGGCGAAACCCGGC149920.11113077116319567No Hit
TCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTC149590.1108861530036182No Hit
ATCCGAGTTGTTATACGCGTATGCCTGGAGAATTGGAATTCTTGTTACTC148840.11033020264094213No Hit
CCCACTACCACAAATTATGCAGTCGAGTTTCCCGCATTTGGGGAAATCGC147570.10938879336014398No Hit
GGGAGAGCGCGGCGACGGGTATCTGGCTTCCTCGGCCCCGGGATTCGGCG144480.10709827786591855No Hit
GACGGAGGGGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGCGGCCCGGCC142210.10541560143488564No Hit
CCCGGAGCCGGTCGCGGCGCACCGCCACGGTGGAAGTGCGCCCGGCGGCG141370.10479293702868844No Hit
CCAAGACGAACGGCTCTCCGCACCGGACCCCGGTCCCGACGCCCGGCGGG140980.10450384284009688No Hit
CCCTCCTACTCGTCGCGGCGTAGCGTCCGCGGGGCCCGACGCCGCGGGGG138180.10242829481943955No Hit
CACGGTGGAAGTGCGCCCGGCGGCGGCCGGTCGCCGGCCGGGGGGCGGTC137720.10208731193033155No Hit
GGGGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGCGGCCCGGCCCCCACC137680.10205766124432218No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)