FastQCFastQC Report
Tue 14 Nov 2023
GSM4106505_pass.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameGSM4106505_pass.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11454638
Sequences flagged as poor quality0
Sequence length35-75
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTTAGGCTAAGGCGTCTTTGCATCTAGTGACAAGGTTTGGACCCTCAGTCGAGAAGCAGGTGTCCTTGTCAGC140530.12268392942666542No Hit
GGAGGATTGGCTTCAGCGCAGCACTTTTCCAGAGTGGCTTCATATTTCTTAGCAAGTCTCAGCAACAGGGATAC116680.10186266907780063No Hit
GGGCGATCTCACTCTTGTGTGCTTCTCGGCGAAACACACCCCTGGAAAAAGCAGAGCCGGAGACGAAGAGGAGG115880.10116426202207351No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)