FastQCFastQC Report
Tue 12 Jul 2022
SRR8543830_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR8543830_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26763579
Sequences flagged as poor quality0
Sequence length35-76
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCCCCCCCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1616610.604033563672482No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN1020220.3811971485577471No Hit
CCCCCCCCCCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT775590.2897930803649243No Hit
CCCCCCCCCCCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT433460.16195890691599954No Hit
CCCCCCCCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT412380.1540825313385777No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA320640.11980460460837468No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)