FastQCFastQC Report
Tue 12 Jul 2022
SRR8543829_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR8543829_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences29390420
Sequences flagged as poor quality0
Sequence length35-76
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCCCCCCCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1001420.3407300746297603No Hit
CCCCCCCCCCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT481050.1636757827890857No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN428050.14564269581720846No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA329880.11224065528835586No Hit
CCCCCCCCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT296200.10078113888811388No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)