FastQCFastQC Report
Tue 19 Jul 2022
SRR8064872_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR8064872_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences102169466
Sequences flagged as poor quality0
Sequence length15-100
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCCAGAGTCGCCGCCGCCGCCGGCCCCCCCGAGTGTCCGGGCCCCCCGC4327190.4235306466219565No Hit
CTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGGCCGGAGGGCTGT3104750.30388237519025496No Hit
CGGGTATCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGGCCGGA1516950.14847390902483526No Hit
CTCGCTATGTTGCCCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATC1249770.1223232389214993No Hit
ATCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGGCCGGAGGGCT1062130.10395767361649909No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)