FastQCFastQC Report
Tue 19 Jul 2022
SRR8064869_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR8064869_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences98868119
Sequences flagged as poor quality0
Sequence length15-100
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGGCCGGAGGGCTGT3321990.33600214443242316No Hit
GTCCAGAGTCGCCGCCGCCGCCGGCCCCCCCGAGTGTCCGGGCCCCCCGC3015970.305049800735058No Hit
CTCGCTATGTTGCCCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATC1393610.14095645938201778No Hit
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGTTAGCCTATCTCGTAT1305090.13200311821447722TruSeq Adapter, Index 19 (97% over 37bp)
CGGGTATCTGGCTTCCTCGGCCCCGGGATTCGGCGAAAGCTGCGGCCGGA1230210.12442939265386449No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)