FastQCFastQC Report
Mon 21 Oct 2024
G237_M02_CKDL240034113-1A_22VLHGLT3_L7_2.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameG237_M02_CKDL240034113-1A_22VLHGLT3_L7_2.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences33595050
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG9725232.8948401624644107No Hit
AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTTCCGTAGTGTGTAGATC496820.14788488185015353Illumina Single End PCR Primer 1 (96% over 33bp)
CTTTAATGTAGAAAAGATTAATGGGGAATGGCATACTATTATCCTGGCCT411230.12240791426117836No Hit
GGCAACTTTAGACTTTTTCTGGAGCAAATCCATGTCTTGGAGAATTCCTT382690.11391261510252254No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)