FastQCFastQC Report
Thu 30 May 2024
G224_M06_CKDL240018118-1A_HH7TVDSXC_L2_2.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameG224_M06_CKDL240018118-1A_HH7TVDSXC_L2_2.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14889272
Sequences flagged as poor quality0
Sequence length150
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCTGAGCCTCCAGTGTTGAGTGGAGACTTCTCACCAGGACTCCACCATC200980.13498309386785332No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA182370.12248416175082301No Hit
CTGTGATCTGCATTCCATCCTGTCTCACTGAGAAGTCCAATTCCAGTCTA169720.11398811170888679No Hit
GGAATCCTTAGAGAAAATATCATTGACCTATCCAATGCCAATCGCTGCCT165210.11095908517219646No Hit
CTGCATTCCATCCTGTCTCACTGAGAAGTCCAATTCCAGTCTATCCACAT161330.10835318207632985No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT158150.10621741613693403No Hit
CTTTCTTATGGCTCATCTCATTAACGAAAAGGATGGGGAAACCTTCCAGC157690.10590846886268179No Hit
CCAGATTTGAGTTCAGACATCAAGGAAAGGTTTGCACAACTATGTGAGAA152340.10231527773822656No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)