FastQCFastQC Report
Thu 30 May 2024
G224_M04_CKDL240018118-1A_HH7TVDSXC_L2_2.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameG224_M04_CKDL240018118-1A_HH7TVDSXC_L2_2.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7825290
Sequences flagged as poor quality0
Sequence length150
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCTGAGCCTCCAGTGTTGAGTGGAGACTTCTCACCAGGACTCCACCATC92190.11781033035197416No Hit
CTTTCTTATGGCTCATCTCATTAACGAAAAGGATGGGGAAACCTTCCAGC86620.11069238328547569No Hit
CTGTGATCTGCATTCCATCCTGTCTCACTGAGAAGTCCAATTCCAGTCTA85700.10951670800698761No Hit
GGAAACCTTCCAGCTGATGGGGCTCTATGGCCGAGAACCAGATTTGAGTT83110.10620692651646137No Hit
GGAATCCTTAGAGAAAATATCATTGACCTATCCAATGCCAATCGCTGCCT80690.10311438937087315No Hit
CTGCATTCCATCCTGTCTCACTGAGAAGTCCAATTCCAGTCTATCCACAT80550.10293548226327714No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)