FastQCFastQC Report
Thu 30 May 2024
G224_M02_CKDL240018118-1A_HH7TVDSXC_L2_2.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameG224_M02_CKDL240018118-1A_HH7TVDSXC_L2_2.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9194265
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTTCTTATGGCTCATCTCATTAACGAAAAGGATGGGGAAACCTTCCAGC212930.2315900183429562No Hit
GGAAACCTTCCAGCTGATGGGGCTCTATGGCCGAGAACCAGATTTGAGTT197560.21487307577060266No Hit
CCAGATTTGAGTTCAGACATCAAGGAAAGGTTTGCACAACTATGTGAGAA194460.21150140875861204No Hit
GCCTGAGCCTCCAGTGTTGAGTGGAGACTTCTCACCAGGACTCCACCATC189500.20610674153942704No Hit
GGGAAACCTTCCAGCTGATGGGGCTCTATGGCCGAGAACCAGATTTGAGT184420.20058155817784237No Hit
CTTTAATGTAGAAAAGATTAATGGGGAATGGCATACTATTATCCTGGCCT183320.1993851602058457No Hit
GGAATCCTTAGAGAAAATATCATTGACCTATCCAATGCCAATCGCTGCCT179430.19515426192305746No Hit
GGCAACTTTAGACTTTTTCTGGAGCAAATCCATGTCTTGGAGAATTCCTT165510.18001438940469958No Hit
GAAAATATCATTGACCTATCCAATGCCAATCGCTGCCTCCAGGCCCGAGA146230.15904479585915784No Hit
CTGTGACGTATGATGGATTCAATACATTTACTATACCTAAGACAGACTAT139040.1512247036603796No Hit
CTTAGAGAAAATATCATTGACCTATCCAATGCCAATCGCTGCCTCCAGGC134230.14599318161919414No Hit
CACGATCACAAGAAAGACGTGGTCCTGACAGACAGACAATCCTATTCCCT133640.14535147725239592No Hit
CGAGAATGAAGAATGGCCTGAGCCTCCAGTGTTGAGTGGAGACTTCTCAC131600.1431327028316021No Hit
GCTAGTTCTACGGGAAGGAACTTTAATGTAGAAAAGATTAATGGGGAATG122780.13353976636522874No Hit
GAAACCTTCCAGCTGATGGGGCTCTATGGCCGAGAACCAGATTTGAGTTC114810.12487131924085286No Hit
CTGTGATCTGCATTCCATCCTGTCTCACTGAGAAGTCCAATTCCAGTCTA114780.12483869020525294No Hit
GGGGAATGGCATACTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGA113230.12315285669925763No Hit
ATTCAATACATTTACTATACCTAAGACAGACTATGATAACTTTCTTATGG111900.12170630278766166No Hit
CTGCATTCCATCCTGTCTCACTGAGAAGTCCAATTCCAGTCTATCCACAT108820.11835638846607097No Hit
CCGAGAACCAGATTTGAGTTCAGACATCAAGGAAAGGTTTGCACAACTAT102600.11159130175168977No Hit
TGCCAATCGCTGCCTCCAGGCCCGAGAATGAAGAATGGCCTGAGCCTCCA97170.10568544630810618No Hit
GAAAGACGTGGTCCTGACAGACAGACAATCCTATTCCCTACCAAAATGAA94860.10317301056691319No Hit
CCAGATTTGAGTTCAGACATCAAGGAAAGGTTTGCAAAACTATGTGAGGA94790.10309687615051338No Hit
GGAAAGGTTTGCACAACTATGTGAGAAGCATGGAATCCTTAGAGAAAATA94660.1029554836629138No Hit
CCGAGAATGAAGAATGGCCTGAGCCTCCAGTGTTGAGTGGAGACTTCTCA94560.10284672021091408No Hit
TGAATATTCTGTGACGTATGATGGATTCAATACATTTACTATACCTAAGA94040.10228115026051565No Hit
CTTCTCACCAGGACTCCACCATCATCCCTTCCTATCCATACAGCATCCCC92290.10037778985052094No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)