FastQCFastQC Report
Fri 23 Feb 2024
G221_M96_CKDL240003768-1A_22JKTWLT3_L7_1.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameG221_M96_CKDL240003768-1A_22JKTWLT3_L7_1.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2019585
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTCAC31010.1535463969082757No Hit
CTTCTATCTTTTCTCTTTTGTCAGAGGCCAGGATAATAGTATGCCATTCC29790.1475055518831839No Hit
CTTTTCGTTAATGAGATGAGCCATAAGAAAGTTATCATAGTCTGTCTTAG29260.14488125035588995No Hit
CTGGAATTGGACTTCTCAGTGAGACAGGATGGAATGCAGATCACAGAATT25810.12779853286690088No Hit
CTTTTCTACATTAAAGTTCCTTCCCGTAGAACTAGCTTCTTCTGCATGGA21650.10720024163380101No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)