FastQCFastQC Report
Fri 23 Feb 2024
G221_M38_CKDL240003768-1A_22JKTWLT3_L7_1.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameG221_M38_CKDL240003768-1A_22JKTWLT3_L7_1.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14681105
Sequences flagged as poor quality0
Sequence length150
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCGAATGTGTGATATGGTGGAGGGCAGCCATGAAGTCATTCTAAATTTG267690.1823364113259867No Hit
CTGGAATTGGACTTCTCAGTGAGACAGGATGGAATGCAGATCACAGAATT258640.17617202519837571No Hit
CTCCGATTAGGTGTATTAATAAGTGTCCTGCAGTAATGTTAGCTGTAAGC198490.13520099474801112No Hit
CTCAAATTATAAAGATCATGATGAGAACAGCTGTTAGTGAAATAAATGAT180810.12315830450092143No Hit
GTCAGTATCATGCTGCGGCTTCAAATCCGAAGTGATGTTTTGATGTGAAG160100.10905173690944926No Hit
CTACTACATAGTATGTATCGTGAAGCACGATGTCAAGGGATGAGTTGGAT157450.10724669566766262No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)