FastQCFastQC Report
Fri 23 Feb 2024
G221_M24_CKDL240003768-1A_22JKTWLT3_L7_1.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameG221_M24_CKDL240003768-1A_22JKTWLT3_L7_1.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11415808
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGGAATTGGACTTCTCAGTGAGACAGGATGGAATGCAGATCACAGAATT450100.3942778294799632No Hit
CTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTCAC395340.3463092581795349No Hit
CTTCTATCTTTTCTCTTTTGTCAGAGGCCAGGATAATAGTATGCCATTCC378290.33137382829143586No Hit
CTTTTCTACATTAAAGTTCCTTCCCGTAGAACTAGCTTCTTCTGCATGGA375160.32863201623573207No Hit
CTTTTCGTTAATGAGATGAGCCATAAGAAAGTTATCATAGTCTGTCTTAG329650.2887662441414572No Hit
CAGGATAATAGTATGCCATTCCCCATTAATCTTTTCTACATTAAAGTTCC254310.22277003958020317No Hit
ATTATCTTCTATCTTTTCTCTTTTGTCAGAGGCCAGGATAATAGTATGCC206690.18105595328863275No Hit
CTTCATTCTCGGGCCTGGAGGCAGCGATTGGCATTGGATAGGTCAATGAT204810.17940911409862537No Hit
CTTTTCTCTTTTGTCAGAGGCCAGGATAATAGTATGCCATTCCCCATTAA190150.16656727232973786No Hit
CTATCTTTTCTCTTTTGTCAGAGGCCAGGATAATAGTATGCCATTCCCCA187190.16397437658376873No Hit
CCAGCCTTTTCTGTTTTGTCAGCAACCATAGATAATTCGGAGCACTCTTC186630.16348382873993675No Hit
GGATAATAGTATGCCATTCCCCATTAATCTTTTCTACATTAAAGTTCCTT162180.142066159486915No Hit
CTTTTCTGTTTTGTCAGCAACCATAGATAATTCGGAGCACTCTTCATCTC157450.1379227821631198No Hit
CTGGAGGCAGCGATTGGCATTGGATAGGTCAATGATATTTTCTCTAAGGA145120.12712196981589038No Hit
CCAGCCTTTTCTGTTTTGTCAGCAACCATAGATAATTCCGAGCACTCTTC144640.12670150023546298No Hit
CAGCGATTGGCATTGGATAGGTCAATGATATTTTCTCTAAGGATTCCATG140700.12325014576278787No Hit
CTCAGCTTTAAACTCTTTGGGGACATATGTTTCATCAACTGTCAGAGCAG134340.11767892382212454No Hit
CTCTTTTGTCAGAGGCCAGGATAATAGTATGCCATTCCCCATTAATCTTT121670.10658027885542573No Hit
CTTTTCTGTTTTGTCAGCAACCATAGATAATTCCGAGCACTCTTCATCTC120370.10544150707510148No Hit
CCCCATTAATCTTTTCTACATTAAAGTTCCTTCCCGTAGAACTAGCTTCT114700.10047471015630256No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)