FastQCFastQC Report
Fri 23 Feb 2024
G221_M23_CKDL240003768-1A_22JKTWLT3_L7_2.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameG221_M23_CKDL240003768-1A_22JKTWLT3_L7_2.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9384317
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG296500.3159526686918185No Hit
CACGATCACAAGAAAGACGTGGTCCTGACAGACAGACAATCCTATTCCCT150720.16060838524529808No Hit
CTTTCTTATGGCTCATCTCATTAACGAAAAGGATGGGGAAACCTTCCAGC128020.13641909155455853No Hit
CTTTAATGTAGAAAAGATTAATGGGGAATGGCATACTATTATCCTGGCCT124930.13312636391119353No Hit
CGATCACAAGAAAGACGTGGTCCTGACAGACAGACAATCCTATTCCCTAC108980.11612992186858138No Hit
AAAGACGTGGTCCTGACAGACAGACAATCCTATTCCCTACCAAAATGAAG98560.10502629013917583No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)