FastQCFastQC Report
Fri 23 Feb 2024
G221_M21_CKDL240003768-1A_22JKTWLT3_L7_1.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameG221_M21_CKDL240003768-1A_22JKTWLT3_L7_1.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9516289
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGGAATTGGACTTCTCAGTGAGACAGGATGGAATGCAGATCACAGAATT187350.1968729617185859No Hit
CAGGATAATAGTATGCCATTCCCCATTAATCTTTTCTACATTAAAGTTCC159810.1679331092193606No Hit
CTTTTCTACATTAAAGTTCCTTCCCGTAGAACTAGCTTCTTCTGCATGGA155990.16391893941009988No Hit
CTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTCAC120410.12653041537515308No Hit
CTTCTATCTTTTCTCTTTTGTCAGAGGCCAGGATAATAGTATGCCATTCC99790.10486230504348912No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)