FastQCFastQC Report
Fri 23 Feb 2024
G221_M19_CKDL240003768-1A_22JKTWLT3_L7_2.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameG221_M19_CKDL240003768-1A_22JKTWLT3_L7_2.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10700680
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG211400.1975575383994288No Hit
CACGATCACAAGAAAGACGTGGTCCTGACAGACAGACAATCCTATTCCCT198990.185960144588942No Hit
AAAGACGTGGTCCTGACAGACAGACAATCCTATTCCCTACCAAAATGAAG125460.11724488537177076No Hit
GAAAGACGTGGTCCTGACAGACAGACAATCCTATTCCCTACCAAAATGAA122080.11408620760549797No Hit
CGATCACAAGAAAGACGTGGTCCTGACAGACAGACAATCCTATTCCCTAC120510.11261901112826474No Hit
CCCAGCTCTGGGACAGCAAGCTGAAAATGACTCCCTCCATCTCATGGGGT119060.1112639570569347No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)