FastQCFastQC Report
Fri 23 Feb 2024
G221_M04A_CKDL240003768-1A_22JKTWLT3_L7_2.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameG221_M04A_CKDL240003768-1A_22JKTWLT3_L7_2.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences45611319
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1565880.343309519288403No Hit
CACGATCACAAGAAAGACGTGGTCCTGACAGACAGACAATCCTATTCCCT796060.17453123861644956No Hit
CTTTAATGTAGAAAAGATTAATGGGGAATGGCATACTATTATCCTGGCCT628830.13786709391149157No Hit
GAAAGACGTGGTCCTGACAGACAGACAATCCTATTCCCTACCAAAATGAA514250.11274613654562368No Hit
CGATCACAAGAAAGACGTGGTCCTGACAGACAGACAATCCTATTCCCTAC474490.10402900209923768No Hit
CTAGCCTCTGGCAAAATGAAGTGGGTAACCTTTCTCCTCCTCCTCTTCGT472410.1035729749451008No Hit
AAAGACGTGGTCCTGACAGACAGACAATCCTATTCCCTACCAAAATGAAG470040.10305336708197367No Hit
CTTTCTTATGGCTCATCTCATTAACGAAAAGGATGGGGAAACCTTCCAGC458790.10058687406080058No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)