FastQCFastQC Report
Mon 4 Dec 2023
G217M21_CKDL230039435-1A_22GGJKLT3_L2_2.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameG217M21_CKDL230039435-1A_22GGJKLT3_L2_2.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16619794
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG656560.3950470144214784No Hit
CTAGCCTCTGGCAAAATGAAGTGGGTAACCTTTCTCCTCCTCCTCTTCGT258510.15554344416061958No Hit
CCCCACTAGCCTCTGGCAAAATGAAGTGGGTAACCTTTCTCCTCCTCCTC221550.13330490137242373No Hit
CACGATCACAAGAAAGACGTGGTCCTGACAGACAGACAATCCTATTCCCT182250.10965839889471554No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)