FastQCFastQC Report
Mon 4 Dec 2023
G217M17_CKDL230039435-1A_22GGJKLT3_L2_1.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameG217M17_CKDL230039435-1A_22GGJKLT3_L2_1.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15971550
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGCGATCTCACTCTTGTGTGCTTCTCGGCGAAACACACCCCTGGAAAAA240070.15031102178561254No Hit
GGCGATCTCACTCTTGTGTGCTTCTCGGCGAAACACACCCCTGGAAAAAG212310.13293011636315824No Hit
GATCGGAAGAGCACACGTCTGAACTCCAGTCACAACCAGAGATCTGGGGG193160.12094004652021875TruSeq Adapter, Index 1 (97% over 36bp)

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)