FastQCFastQC Report
Thu 5 Sep 2024
G216M65_CKDL230039434-1A_22GGJKLT3_L2_2.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameG216M65_CKDL230039434-1A_22GGJKLT3_L2_2.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18013537
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG906210.5030716621616288No Hit
CACGATCACAAGAAAGACGTGGTCCTGACAGACAGACAATCCTATTCCCT581630.3228849503570565No Hit
GAAAGACGTGGTCCTGACAGACAGACAATCCTATTCCCTACCAAAATGAA370350.20559538085163395No Hit
CGATCACAAGAAAGACGTGGTCCTGACAGACAGACAATCCTATTCCCTAC280500.1557162260804194No Hit
CTTTAATGTAGAAAAGATTAATGGGGAATGGCATACTATTATCCTGGCCT227040.1260385453450924No Hit
AAAGACGTGGTCCTGACAGACAGACAATCCTATTCCCTACCAAAATGAAG220240.12226360653102164No Hit
CCCAGCTCTGGGACAGCAAGCTGAAAATGACTCCCTCCATCTCATGGGGT200980.11157164747822707No Hit
GGCAACTTTAGACTTTTTCTGGAGCAAATCCATGTCTTGGAGAATTCCTT187910.10431599302235868No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)