FastQCFastQC Report
Thu 5 Sep 2024
G216M54_CKDL230039434-1A_22GGJKLT3_L2_2.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameG216M54_CKDL230039434-1A_22GGJKLT3_L2_2.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12167456
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG589570.48454664639839257No Hit
CTAGCCTCTGGCAAAATGAAGTGGGTAACCTTTCTCCTCCTCCTCTTCGT194970.1602389192942222No Hit
CACGATCACAAGAAAGACGTGGTCCTGACAGACAGACAATCCTATTCCCT190330.1564254680682634No Hit
CCCCACTAGCCTCTGGCAAAATGAAGTGGGTAACCTTTCTCCTCCTCCTC175100.14390847191064426No Hit
CCCAGCTCTGGGACAGCAAGCTGAAAATGACTCCCTCCATCTCATGGGGT125800.1033905526348318No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)