FastQCFastQC Report
Tue 26 Sep 2023
4_Waxman_I94_S4_R1_001.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4_Waxman_I94_S4_R1_001.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences25868496
Sequences flagged as poor quality0
Sequence length101
%GC49

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCAATGGAGAATCTC261720.10117325723149888No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)