FastQCFastQC Report
Tue 26 Sep 2023
17_Waxman_I107_S17_R2_001.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename17_Waxman_I107_S17_R2_001.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences28230160
Sequences flagged as poor quality0
Sequence length101
%GC49

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACTGTCTCTTATACACATCTGACGCTGCCGACGACTGAGCCGGTGTGTAG1158620.41041921122657465No Hit
CCTGTCTCTTATACACATCTGACGCTGCCGACGACTGAGCCGGTGTGTAG504020.17853954777443698No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)