FastQCFastQC Report
Sun 25 Sep 2022
D21_1.fq

Summary

[OK]Basic Statistics

MeasureValue
FilenameD21_1.fq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26136921
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CATATATATGCATATATATGCATATATATGCATATATATGCATATATATG977660.3740532406246321No Hit
CATATATATGCATATATATGCATATATATGAGATCGGAAGAGCACACGTC791170.3027020665517564No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT543000.20775209138061823No Hit
CATATATATGCATATATATGCATATATATGCATATATATGAGATCGGAAG378100.14466126289320766No Hit
CTGGAGGCAGCGATTGGCATTGGATAGGTCAATGATATTTTCTCTAAGGA289430.11073607331177227No Hit
ATATATATGCATATATATGCATATATATGCATATATATGCATATATATGC287800.1101124344370938No Hit
GTTTAGGCTAAGGCGTCTTTGCATCTAGTGACAAGGTTTGGACCCTCAGT283820.10858968430137582No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)