FastQCFastQC Report
Thu 13 Oct 2022
G194M32_S52_L004_R1_001.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameG194M32_S52_L004_R1_001.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences34275487
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTCAC415080.12110112396068945No Hit
GCCTTTTCTGTTTTGTCAGCAACCATAGATAATTCGGAGCACTCTTCATC373580.10899334559418512No Hit
GCCTTTTCTGTTTTGTCAGCAACCATAGATAATTCCGAGCACTCTTCATC347050.10125312005048973No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)