FastQCFastQC Report
Tue 16 Mar 2021
G184_M19_CKDL200149567-1a-25_H7T5YBBXX_L3_1.fq

Summary

[OK]Basic Statistics

MeasureValue
FilenameG184_M19_CKDL200149567-1a-25_H7T5YBBXX_L3_1.fq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences29595255
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACACTGATATATCTCGTAT543100.18350914698994822TruSeq Adapter, Index 25 (97% over 44bp)
CTGGAATTGGACTTCTCAGTGAGACAGGATGGAATGCAGATCACAGAATT309130.10445255497883023No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)