FastQCFastQC Report
Mon 7 Feb 2022
664_R1_001.fastq

Summary

[OK]Basic Statistics

MeasureValue
Filename664_R1_001.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences42653825
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGGAGTCTAACGCGTGCGCGAGTCAGGGGCTCGTCCGAAAGCCGCCGTG1633680.38300902674027476No Hit
GCCCTCTTGAACTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTA694230.16275914293735674No Hit
CAAGAAAGACGTGGTCCTGACAGACAGACAATCCTATTCCCTACCAAAAT571470.13397860567018316No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)