# /projectnb/wax-es/routines/BIN/stringtie -L barcode56.sorted.filtered.spliced.bam -o barcode56.NOREF.spliced.gtf
# StringTie version 3.0.1
chr13	StringTie	transcript	54695235	54712625	1000	-	.	gene_id "STRG.1"; transcript_id "STRG.1.1"; longcov "6.000000"; cov "6.000000"; FPKM "214722.828125"; TPM "204279.421875";
chr13	StringTie	exon	54695235	54695403	1000	-	.	gene_id "STRG.1"; transcript_id "STRG.1.1"; exon_number "1"; cov "6.000000";
chr13	StringTie	exon	54700083	54700194	1000	-	.	gene_id "STRG.1"; transcript_id "STRG.1.1"; exon_number "2"; cov "6.000000";
chr13	StringTie	exon	54700405	54700522	1000	-	.	gene_id "STRG.1"; transcript_id "STRG.1.1"; exon_number "3"; cov "6.000000";
chr13	StringTie	exon	54708005	54708051	1000	-	.	gene_id "STRG.1"; transcript_id "STRG.1.1"; exon_number "4"; cov "6.000000";
chr13	StringTie	exon	54712439	54712625	1000	-	.	gene_id "STRG.1"; transcript_id "STRG.1.1"; exon_number "5"; cov "6.000000";
chr13	StringTie	transcript	54695235	54712625	1000	+	.	gene_id "STRG.2"; transcript_id "STRG.2.1"; longcov "2.000000"; cov "2.000000"; FPKM "71574.273438"; TPM "68093.140625";
chr13	StringTie	exon	54695235	54695409	1000	+	.	gene_id "STRG.2"; transcript_id "STRG.2.1"; exon_number "1"; cov "2.000000";
chr13	StringTie	exon	54700085	54700196	1000	+	.	gene_id "STRG.2"; transcript_id "STRG.2.1"; exon_number "2"; cov "2.000000";
chr13	StringTie	exon	54700405	54700554	1000	+	.	gene_id "STRG.2"; transcript_id "STRG.2.1"; exon_number "3"; cov "2.000000";
chr13	StringTie	exon	54712421	54712625	1000	+	.	gene_id "STRG.2"; transcript_id "STRG.2.1"; exon_number "4"; cov "2.000000";
chr2	StringTie	transcript	35231337	35258328	1000	+	.	gene_id "STRG.3"; transcript_id "STRG.3.1"; longcov "22.000000"; cov "21.371534"; FPKM "764826.062500"; TPM "727627.437500";
chr2	StringTie	exon	35231337	35231613	1000	+	.	gene_id "STRG.3"; transcript_id "STRG.3.1"; exon_number "1"; cov "20.772562";
chr2	StringTie	exon	35258065	35258328	1000	+	.	gene_id "STRG.3"; transcript_id "STRG.3.1"; exon_number "2"; cov "22.000000";